CATH Domain: 1r0mA02 XML data for domain: 1r0mA02

Molscript image for 1r0mA02
1r0mA02
PDB coordinates for domain 1r0mA02

PDB 1r0m, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.20 TIM Barrel
3.20.20.120 Enolase superfamily Gene3D
3.20.20.120.2
3.20.20.120.2.1
3.20.20.120.2.1.1
3.20.20.120.2.1.1.1
3.20.20.120.2.1.1.1.1

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Segment boundaries for domain 1r0mA02

Chopping figure for domain 1r0mA02
DomainStart PDB ResidueStop PDB Residue
1r0mA01 6 123
1r0mA01 354 375
1r0mA02 124 353

Structural Neighbourhood (37 entries)

There are 37 matching structural neighberhood comparisons for CATH ID 3.20.20.120.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 37 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2pgwA02 87.08 Sinorhizobium melilotiToluene and xylene degradationBenzoate degradation via hydroxylationMuconate cycloisomerase [EC:5.5.1.1]Mandelate racemase/muconate lactonizing enzyme family protein 3.20.20.120 215 21 91 2.11 2.30
2qdeA02 86.96 Aromatoleum aromaticum EbN1Mandelate racemase/muconate lactonizing enzyme family protein 3.20.20.120 239 26 93 1.94 2.07
2oqhA02 86.81 Putative isomeraseStreptomyces coelicolor 3.20.20.120 240 29 91 1.65 1.81
2pmqA02 86.79 Roseovarius sp. HTCC2601Mandelate racemase/muconate lactonizing enzyme 3.20.20.120 224 25 93 1.81 1.93
3dgbA02 86.49 Muconate cycloisomeraseToluene and xylene degradationMuconate cycloisomerase [EC:5.5.1.1]Benzoate degradation via hydroxylationFluorobenzoate degradation 3.20.20.120 236 26 96 2.03 2.10
1tkkA02 86.27 Bacillus subtilisL-Ala-D/L-Glu epimerase 3.20.20.120 244 21 93 2.08 2.24
2qddA02 86.26 Mandelate racemase/muconate lactonizing enzyme, putativeRoseovarius nubinhibens ISM 3.20.20.120 236 27 93 1.87 2.00
3cb3A02 85.73 Toluene and xylene degradationPolaromonas sp. JS666Mandelate racemase [EC:5.1.2.2]Mandelate racemase/muconate lactonizing enzymeBenzoate degradation via hydroxylation 3.20.20.120 233 23 94 2.67 2.83
3fv9A02 85.41 Mandelate racemase/muconate lactonizing enzyme, putativeRoseovarius nubinhibens ISM 3.20.20.120 243 24 92 1.98 2.15
2qvhA02 85.31 Ubiquinone and other terpenoid-quinone biosynthesisThermobifida fusca YXO-succinylbenzoate-CoA synthaseO-succinylbenzoate synthase [EC:4.2.1.113]Metabolic pathways 3.20.20.120 224 27 93 2.96 3.15
1mdlA02 85.20 Mandelate racemasePseudomonas putida 3.20.20.120 230 22 95 2.35 2.47
2chrA02 85.17 Ralstonia eutropha JMP134Chloromuconate cycloisomeraseToluene and xylene degradationMuconate cycloisomerase [EC:5.5.1.1]Benzoate degradation via hydroxylation 3.20.20.120 202 19 84 2.01 2.37
2oqyA02 85.07 Muconate cycloisomeraseOceanobacillus iheyensis 3.20.20.120 226 19 93 2.74 2.93
2zadA02 85.06 Thermotoga maritimaL-Ala-D/L-Glu epimerase 3.20.20.120 222 22 93 2.33 2.48
2pgeA02 84.89 Ubiquinone and other terpenoid-quinone biosynthesisDesulfotalea psychrophilaRelated to N-acylamino acid racemase (MenC)O-succinylbenzoate synthase [EC:4.2.1.113]Metabolic pathways 3.20.20.120 229 21 96 2.99 3.10
2qgyA02 84.58 3.20.20.120 231 14 97 2.73 2.80
2ovlA02 84.52 Toluene and xylene degradationStreptomyces coelicolorMandelate racemase [EC:5.1.2.2]Benzoate degradation via hydroxylationPutative racemase 3.20.20.120 223 24 91 2.19 2.40
2qjjC02 84.34 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain proteinStarvation sensing protein RspANovosphingobium aromaticivorans DSM 12444 3.20.20.120 244 20 90 2.21 2.44
3bjsA02 84.32 Polaromonas sp. JS666Mandelate racemase/muconate lactonizing enzyme 3.20.20.120 250 26 90 2.28 2.53
2pozH02 83.97 Putative dehydrataseMesorhizobium loti 3.20.20.120 246 21 90 2.26 2.49
1jpdX02 83.85 Racemase and epimerase activity, acting on amino acids and derivativesL-Ala-D/L-Glu epimeraseEscherichia coli K-12 3.20.20.120 207 22 89 2.25 2.51
1ec7A02 83.52 Ascorbate and aldarate metabolismD-glucarate catabolic processGlucarate dehydratase activityGlucarate dehydrataseGlucarate dehydratase [EC:4.2.1.40] 3.20.20.120 261 22 85 2.40 2.82
2nqlA02 83.45 Agrobacterium tumefaciens str. C58Isomerase/lactonizing enzyme 3.20.20.120 214 13 92 2.41 2.61
1rvkA02 83.45 Agrobacterium tumefaciens str. C58Isomerase/lactonizing enzyme 3.20.20.120 255 23 85 2.39 2.81
1yeyB02 83.42 Xanthomonas campestris pv. campestrisRTS beta protein 3.20.20.120 243 23 86 2.32 2.68
2qq6A02 82.97 Rubrobacter xylanophilus DSM 9941Mandelate racemase/muconate lactonizing enzyme-like protein 3.20.20.120 262 23 84 2.46 2.90
2oz8A02 82.95 Mesorhizobium lotiMll7089 protein 3.20.20.120 230 20 93 3.06 3.27
2hzgA02 82.73 Rhodobacter sphaeroides 2.4.1Mandelate racemase/muconate lactonizing enzyme/Enolase superfamily 3.20.20.120 248 24 92 2.89 3.13
2podB02 82.65 Mandelate racemase / muconate lactonizing enzymeBurkholderia pseudomallei 3.20.20.120 251 24 89 2.36 2.64
3cyjA02 82.06 Rubrobacter xylanophilus DSM 9941Mandelate racemase/muconate lactonizing enzyme-like proteinToluene and xylene degradationMandelate racemase [EC:5.1.2.2]Benzoate degradation via hydroxylation 3.20.20.120 235 20 93 2.99 3.21
3go2A02 81.62 Burkholderia xenovorans LB400Putative uncharacterized protein 3.20.20.120 268 16 83 2.55 3.06
1r6wA01 81.22 Ubiquinone and other terpenoid-quinone biosynthesisMetabolic pathwaysMenaquinone biosynthetic processO-succinylbenzoate synthaseHydro-lyase activity 3.20.20.120 198 16 83 2.94 3.54
2oztA02 80.74 Ubiquinone and other terpenoid-quinone biosynthesisThermosynechococcus elongatus BP-1O-succinylbenzoate synthase [EC:4.2.1.113]Tlr1174 proteinMetabolic pathways 3.20.20.120 201 21 84 2.96 3.49
2oktA02 80.58 Ubiquinone and other terpenoid-quinone biosynthesisMetabolic pathwaysO-succinylbenzoic acid (OSB) synthetase, putativeStaphylococcus aureus subsp. aureus COLO-succinylbenzoate synthase [EC:4.2.1.113] 3.20.20.120 189 26 81 3.19 3.90
3cawA02 80.27 Ubiquinone and other terpenoid-quinone biosynthesisO-succinylbenzoate synthase [EC:4.2.1.113]Bdellovibrio bacteriovorusMetabolic pathwaysPutative uncharacterized protein 3.20.20.120 225 13 91 3.27 3.58
1tzzA02 80.04 Bradyrhizobium japonicumBll6730 protein 3.20.20.120 256 21 86 3.28 3.80
1o1zA00 73.58 Thermotoga maritimaGlycerophospholipid metabolismGlycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]Putative uncharacterized protein 3.20.20.190 226 8 77 3.72 4.78
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Displaying entries 1 to 37 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1r0mA02
VPLGTLLGGHKEQVEVGVSLGIQADEQATVDLVRRHVEQGYRRIKLKIKPGWDVQPVRATREAFPDIRLTVDANSAYTLA
DAGRLRQLDEYDLTYIEQPLAWDDLVDHAELARRIRTPLCLDESVASASDARKALALGAGGVINLKVARVGGHAESRRVH
DVAQSFGAPVWCGGMLESGIGRAHNIHLSTLSNFRLPGDTSSASRYWERDLIQEPLEAVDGLMPVPQGPG
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1r0mA02
VPLGTLLGGHKEQVEVGVSLGIQADEQATVDLVRRHVEQGYRRIKLKIKPGWDVQPVRATREAFPDIRLTVDANSAYTLA
DAGRLRQLDEYDLTYIEQPLAWDDLVDHAELARRIRTPLCLDESVASASDARKALALGAGGVINLKVARVGGHAESRRVH
DVAQSFGAPVWCGGMLESGIGRAHNIHLSTLSNFRLPGDTSSASRYWERDLIQEPLEAVDGLMPVPQGPG
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 05 Mar 2006 23:37

Cut based on decision in database "DomChop" on "cathdb"