CATH Domain: 1qyrA02 XML data for domain: 1qyrA02

Molscript image for 1qyrA02
1qyrA02
PDB coordinates for domain 1qyrA02

PDB 1qyr, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.8 Helicase, Ruva Protein; domain 3
1.10.8.100 Gene3D
1.10.8.100.2
1.10.8.100.2.1
1.10.8.100.2.1.1
1.10.8.100.2.1.1.1
1.10.8.100.2.1.1.1.1

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Segment boundaries for domain 1qyrA02

Chopping figure for domain 1qyrA02
DomainStart PDB ResidueStop PDB Residue
1qyrA01 17 200
1qyrA02 201 268

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 1.10.8.100.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2gqfA03 81.63 Haemophilus influenzaeUncharacterized protein HI_0933 1.10.8.260 60 11 75 2.53 3.37
1i4wA02 81.46 Mitochondrial intermembrane spaceMitochondrial transcription factor 1Mitochondrial matrixMitochondrial DNA-directed RNA polymerase complexSaccharomyces cerevisiae 1.10.8.100 75 7 89 3.28 3.67
1wdcC01 75.04 Myosin essential light chain, striated adductor muscleArgopecten irradians 1.10.238.10 78 5 82 3.89 4.74
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1qyrA02
PHPVKDVRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAENA
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1qyrA02
PHPVKDVRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAENA
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 05 Mar 2006 23:37

Cut based on decision in database "DomChop" on "cathdb"