CATH Domain: 1qvzA00 XML data for domain: 1qvzA00

Molscript image for 1qvzA00
1qvzA00
PDB coordinates for domain 1qvzA00

PDB 1qvz, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.880 Gene3D
3.40.50.880.13
3.40.50.880.13.1
3.40.50.880.13.1.1
3.40.50.880.13.1.1.1
3.40.50.880.13.1.1.1.1

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Segment boundaries for domain 1qvzA00

Chopping figure for domain 1qvzA00
DomainStart PDB ResidueStop PDB Residue
1qvzA00 2 237

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 3.40.50.880.13.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2vrnA00 82.17 Protease I [EC:3.2.-.-]Deinococcus radioduransProtease I 3.40.50.880 184 15 74 2.94 3.97
1oi4A00 81.30 Protease I [EC:3.2.-.-]Response to pHResponse to heatProtein yhbOEscherichia coli K-12 3.40.50.880 191 17 71 2.39 3.35
1n57A00 80.43 Molecular chaperone HchA (Hsp31)Escherichia coli K-12Chaperone protein hchACytosol 3.40.50.880 272 20 76 3.27 4.30
3cneA00 78.72 Putative protease IBacteroides thetaiotaomicron 3.40.50.880 167 15 67 2.82 4.15
1iphC03 76.70 Metabolic pathwaysMethane metabolismTryptophan metabolismCatalase [EC:1.11.1.6]Catalase activity 3.40.50.880 154 11 58 2.66 4.55
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Displaying entries 1 to 5 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1qvzA00
APKKVLLALTSYNDVFYSDGKTGVFVVEALHPFNTFRKEGFEVDFVSETGKFGWDEHSLAKDFLNGQDETDFKNKDSDFN
KTLAKIKTPKEVNADDYQIFASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAVHGPAFDGLTDKKTGRPLIEGKSITGF
TDVGETIGVDSILKAKNLATVEDVAKKYGAKYLAPVGPWDDYSITDGRLVTGVNPASAHSTAVRSIDALKN
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1qvzA00
MAPKKVLLALTSYNDVFYSDGXKTGVFVVEALHPFNTFRKEGFEVDFVSETGKFGWDEHSLAKDFLNGQDETDFKNKDSD
FNKTLAKIKTPKEVNADDYQIFXASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAVXHGPAXFDGLTDKKTGRPLIEGK
SITGFTDVGETIXGVDSILKAKNLATVEDVAKKYGAKYLAPVGPWDDYSITDGRLVTGVNPASAHSTAVRSIDALKN
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:18

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:18

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:41

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"