CATH Domain: 1qtqA02 XML data for domain: 1qtqA02

Molscript image for 1qtqA02
1qtqA02
PDB coordinates for domain 1qtqA02

PDB 1qtq, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.40 Beta Barrel
2.40.240 Ribosomal Protein L25; Chain P
2.40.240.10 Ribosomal Protein L25; Chain P Gene3D
2.40.240.10.2
2.40.240.10.2.1
2.40.240.10.2.1.1
2.40.240.10.2.1.1.1
2.40.240.10.2.1.1.1.1

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Segment boundaries for domain 1qtqA02

Chopping figure for domain 1qtqA02
DomainStart PDB ResidueStop PDB Residue
1qtqA01 347 464
1qtqA02 339 346
1qtqA02 465 546
1qtqA03 260 338
1qtqA04 100 208
1qtqA05 27 99
1qtqA05 210 259

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 2.40.240.10.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1feuA01 79.04 50S ribosomal protein L25Thermus thermophilus 2.40.240.10 91 8 65 2.44 3.70
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1qtqA02
APRAMAVILPVEIRLYDRLFSVPNPGAADDFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKP
VFNRTVGLRD
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1qtqA02
APRAMAVILPVEIRLYDRLFSVPNPGAADDFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKP
VFNRTVGLRD
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:34

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:34

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:38

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"