CATH Domain: 1qq5A01 XML data for domain: 1qq5A01

Molscript image for 1qq5A01
1qq5A01
PDB coordinates for domain 1qq5A01

PDB 1qq5, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.1000 Gene3D
3.40.50.1000.7
3.40.50.1000.7.1
3.40.50.1000.7.1.1
3.40.50.1000.7.1.1.1
3.40.50.1000.7.1.1.1.1

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Segment boundaries for domain 1qq5A01

Chopping figure for domain 1qq5A01
DomainStart PDB ResidueStop PDB Residue
1qq5A01 1 15
1qq5A01 91 241
1qq5A02 16 90

Structural Neighbourhood (41 entries)

There are 41 matching structural neighberhood comparisons for CATH ID 3.40.50.1000.7.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 41 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2nyvA01 86.39 Phosphoglycolate phosphatase [EC:3.1.3.18]Glyoxylate and dicarboxylate metabolismMetabolic pathwaysAquifex aeolicusPhosphoglycolate phosphatase 3.40.50.1000 151 25 84 2.27 2.67
2hszA01 86.37 Phosphoglycolate phosphatase [EC:3.1.3.18]Haemophilus somnus 129PTMetabolic pathwaysGlyoxylate and dicarboxylate metabolismPhosphoglycolate phosphatase 3.40.50.1000 148 20 86 2.87 3.33
3e58B01 86.08 Streptococcus thermophilus LMG 18311Beta-phosphoglucomutase, putative 3.40.50.1000 136 20 78 1.64 2.08
2fdrA01 85.88 Agrobacterium tumefaciens str. C58Putative uncharacterized protein 3.40.50.1000 150 22 86 3.04 3.53
2ah5A01 85.69 Glyoxylate and dicarboxylate metabolismMetabolic pathwaysPhosphoglycolate phosphatase [EC:3.1.3.18]Hydrolase, haloacid dehalogenase-like familyStreptococcus pneumoniae 3.40.50.1000 142 19 83 2.30 2.75
1te2A01 85.65 Fructose and mannose metabolismMetabolic pathwaysRiboflavin metabolismThiamine metabolismMetal ion binding 3.40.50.1000 141 21 81 2.17 2.67
3ed5A01 85.38 Putative HAD-hydrolase yfnBBacillus subtilis2-haloacid dehalogenase [EC:3.8.1.2]1,2-Dichloroethane degradationGamma-Hexachlorocyclohexane degradation 3.40.50.1000 140 13 80 1.81 2.24
2hdoA01 84.79 Phosphoglycolate phosphatase [EC:3.1.3.18]Lactobacillus plantarumMetabolic pathwaysGlyoxylate and dicarboxylate metabolismPhosphoglycolate phosphatase (Putative) 3.40.50.1000 134 20 80 2.12 2.65
2hi0A01 84.76 Putative phosphoglycolate phosphatasePhosphoglycolate phosphatase [EC:3.1.3.18]Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842Metabolic pathwaysGlyoxylate and dicarboxylate metabolism 3.40.50.1000 146 23 81 2.19 2.67
3d6jA01 84.35 Phosphoglycolate phosphatase [EC:3.1.3.18]Putative haloacid dehalogenase-like hydrolaseBacteroides fragilis NCTC 9343Glyoxylate and dicarboxylate metabolismMetabolic pathways 3.40.50.1000 137 26 81 2.15 2.64
2pkeA01 84.30 Xanthomonas campestris pv. campestrisPutative hydrolase of the HAD superfamilyHydrolase, haloacid delahogenase-like family 3.40.50.1000 152 16 78 2.26 2.89
1swvA01 83.68 Bacillus cereusPhosphonoacetaldehyde hydrolase 3.40.50.1000 178 18 82 2.82 3.41
2b0cA01 83.14 Phosphatase yihXGlucose-1-phosphatase activityPutative hydrolase of the HAD superfamilyEscherichia coli K-12 3.40.50.1000 133 18 77 2.86 3.71
2qltA01 83.06 Response to osmotic stressNucleusProtein bindingMetabolic pathwaysCytoplasm 3.40.50.1000 171 16 81 2.63 3.24
1u7pD00 83.02 Mus musculusMagnesium-dependent phosphatase 1 3.40.50.1000 161 13 74 2.76 3.72
2ho4B01 82.93 Mus musculusHaloacid dehalogenase-like hydrolase domain-containing protein 2 3.40.50.1000 159 16 84 3.13 3.68
2fi1A01 82.90 Hydrolase, haloacid dehalogenase-like familyStreptococcus pneumoniae 3.40.50.1000 123 14 71 1.89 2.66
1zjjB01 82.67 4-nitrophenyl phosphatase [EC:3.1.3.41]Pyrococcus horikoshiiGamma-Hexachlorocyclohexane degradationPutative uncharacterized protein PH1952 3.40.50.1000 146 22 80 2.51 3.11
2oycA01 82.59 Vitamin B6 metabolismPyridoxal phosphate phosphataseHomo sapiensPyridoxal phosphatase [EC:3.1.3.74]Metabolic pathways 3.40.50.1000 167 17 79 2.41 3.03
2p11A01 82.29 Burkholderia xenovorans LB400Putative uncharacterized protein 3.40.50.1000 140 20 77 2.75 3.54
2hcfA01 82.28 Chlorobaculum tepidumHydrolase, haloacid dehalogenase-like family 3.40.50.1000 156 13 83 2.57 3.09
2pr7A00 82.10 Corynebacterium glutamicumHaloacid dehalogenase/epoxide hydrolase family 3.40.50.1000 131 16 74 3.28 4.39
3dv9A01 82.09 Bacteroides vulgatus ATCC 8482Putative beta-phosphoglucomutase 3.40.50.1000 160 16 80 2.57 3.18
3i28A01 81.93 PeroxisomeSoluble epoxide hydrolase [EC:3.3.2.10]Arachidonic acid metabolismEpoxide hydrolase activityEpoxide hydrolase 2 3.40.50.1000 135 24 76 3.49 4.56
2hx1A01 81.57 Cytophaga hutchinsonii ATCC 33406Possible sugar phosphatase, HAD superfamily 3.40.50.1000 155 18 80 3.24 4.04
2i6xA01 81.47 Hydrolase, haloacid dehalogenase-like familyPutative hydrolase of the HAD superfamilyPorphyromonas gingivalis 3.40.50.1000 127 23 71 2.50 3.49
1cqzA01 81.28 PeroxisomeMus musculusSoluble epoxide hydrolase [EC:3.3.2.10]Arachidonic acid metabolismEpoxide hydrolase 2 3.40.50.1000 162 16 77 3.54 4.59
1nnlA01 80.80 Phosphoserine phosphatase [EC:3.1.3.3]Phosphoserine phosphataseGlycine, serine and threonine metabolismHomo sapiensPhosphoserine phosphatase activity 3.40.50.1000 154 9 80 3.08 3.82
1l7mB01 80.66 Phosphoserine phosphatase [EC:3.1.3.3]Methanocaldococcus jannaschiiPhosphoserine phosphataseGlycine, serine and threonine metabolismMetabolic pathways 3.40.50.1000 147 11 74 2.83 3.79
1wpgA04 80.41 Calcium ion bindingATP catabolic processER-Golgi intermediate compartmentCalcium-transporting ATPase activitySarcoplasmic/endoplasmic reticulum calcium ATPase 1 3.40.50.1000 156 8 77 3.61 4.65
1k1eD00 80.14 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]Haemophilus influenzaeLipopolysaccharide biosynthesisMetabolic pathways 3.40.50.1000 170 13 76 2.63 3.44
1rlmA01 79.74 Sugar phosphatase supHSugar-phosphatase [EC:3.1.3.23]Escherichia coli K-12 3.40.50.1000 162 12 80 3.24 4.01
1nf2A01 79.52 Thermotoga maritimaPutative uncharacterized protein 3.40.50.1000 161 11 82 3.17 3.84
1s2oA01 78.99 Synechocystis sp. PCC 6803Slr0953 protein 3.40.50.1000 173 11 78 3.01 3.86
3cnhA01 78.84 Hydrolase family proteinPutative hydrolase of the HAD superfamilyDeinococcus radiodurans 3.40.50.1000 114 26 67 2.75 4.08
3bwvA01 78.47 Putative 5'(3')-deoxyribonucleotidaseStaphylococcus epidermidis ATCC 12228 3.40.50.1000 121 9 67 2.87 4.25
3dnpA01 78.39 Stress response protein yhaXBacillus subtilis 3.40.50.1000 144 8 73 3.21 4.37
3fvvA01 78.30 Bordetella pertussisPutative uncharacterized protein 3.40.50.1000 148 10 73 2.89 3.93
1u02A01 78.12 Trehalose-6-phosphate phosphatase related proteinThermoplasma acidophilum 3.40.50.1000 149 10 72 2.99 4.10
3b8cA03 77.30 Oxidative phosphorylationArabidopsis thalianaPlasma membraneATPase 2, plasma membrane-typeProtein binding 3.40.50.1000 163 12 77 3.57 4.59
1ltqA02 76.97 Polynucleotide kinaseEnterobacteria phage T4 3.40.50.1000 136 11 66 3.02 4.52
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Displaying entries 1 to 41 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1qq5A01
MIKAVVFDAYGTLFDRLTPYPDAAQCLAELAPLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYAL
VEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALG
DLPRLV
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1qq5A01
MIKAVVFDAYGTLFDRLTPYPDAAQCLAELAPLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYAL
VEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALG
DLPRLV
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:18

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:18

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:37

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"