CATH Domain: 1qopA00 XML data for domain: 1qopA00

Molscript image for 1qopA00
1qopA00
PDB coordinates for domain 1qopA00

PDB 1qop, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.20 TIM Barrel
3.20.20.70 Aldolase class I Gene3D
3.20.20.70.9
3.20.20.70.9.1
3.20.20.70.9.1.1
3.20.20.70.9.1.1.1
3.20.20.70.9.1.1.1.1

Segment boundaries for domain 1qopA00

Chopping figure for domain 1qopA00
DomainStart PDB ResidueStop PDB Residue
1qopA00 1 267

Structural Neighbourhood (20 entries)

There are 20 matching structural neighberhood comparisons for CATH ID 3.20.20.70.9.1.1.1.1 (SIMAX score < 5)

Displaying entries 1 to 20 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1rd5A00 87.78 Indole-3-glycerol-phosphate lyase [EC:4.1.2.8]Indole-3-glycerol phosphate lyase, chloroplasticBenzoxazinoid biosynthesisZea maysMetabolic pathways 3.20.20.70 261 32 97 2.89 2.96
1ujpA00 87.07 Thermus thermophilus HB8Phenylalanine, tyrosine and tryptophan biosynthesisTryptophan synthase alpha chain [EC:4.2.1.20]Glycine, serine and threonine metabolismTryptophan synthase alpha chain 3.20.20.70 243 26 89 1.69 1.88
1a53A00 79.81 Indole-3-glycerol phosphate synthase [EC:4.1.1.48]Phenylalanine, tyrosine and tryptophan biosynthesisSulfolobus solfataricusIndole-3-glycerol phosphate synthaseMetabolic pathways 3.20.20.70 247 12 80 3.51 4.37
1vc4A00 79.35 Indole-3-glycerol phosphate synthase [EC:4.1.1.48]Phenylalanine, tyrosine and tryptophan biosynthesisIndole-3-glycerol phosphate synthaseMetabolic pathwaysThermus thermophilus 3.20.20.70 254 9 80 3.53 4.37
1i4nA00 78.91 Thermotoga maritimaIndole-3-glycerol phosphate synthase 3.20.20.70 251 11 81 3.70 4.56
1w0mA00 78.70 Thermoproteus tenaxTriosephosphate isomerase 3.20.20.70 225 12 77 3.37 4.36
1xi3A00 77.98 Pyrococcus furiosusThiamine metabolismThiamine-phosphate pyrophosphorylaseThiamine-phosphate pyrophosphorylase [EC:2.5.1.3]Metabolic pathways 3.20.20.70 202 13 73 3.29 4.47
1wa3D00 77.93 Thermotoga maritimaArginine and proline metabolism2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]Glyoxylate and dicarboxylate metabolism 3.20.20.70 203 14 74 3.17 4.26
1q6oB00 77.82 Ascorbate and aldarate metabolism3-keto-L-gulonate-6-phosphate decarboxylase ulaDMagnesium ion binding3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]3-dehydro-L-gulonate-6-phosphate decarboxylase activity 3.20.20.70 215 10 78 3.78 4.82
3f4wA00 77.79 Pentose and glucuronate interconversionsMethane metabolismPutative hexulose 6 phosphate synthaseSalmonella enterica subsp. enterica serovar Typhimurium3-hexulose-6-phosphate synthase [EC:4.1.2.43] 3.20.20.70 211 16 76 3.57 4.64
1thfD00 77.75 Thermotoga maritimaCyclase HisF [EC:4.1.3.-]Imidazole glycerol phosphate synthase subunit hisFHistidine metabolismMetabolic pathways 3.20.20.70 253 11 77 3.26 4.19
1tqjC00 77.66 Ribulose-phosphate 3-epimerasePentose phosphate pathwayPentose and glucuronate interconversionsCarbon fixation in photosynthetic organismsRibulose-phosphate 3-epimerase [EC:5.1.3.1] 3.20.20.70 218 13 78 3.90 4.99
2fliC00 77.57 Pentose phosphate pathwayPentose and glucuronate interconversionsMetabolic pathwaysRibulose-phosphate 3-epimerase [EC:5.1.3.1]Streptococcus pyogenes serotype M1 3.20.20.70 219 11 80 3.63 4.54
1piiA01 76.75 Phenylalanine, tyrosine and tryptophan biosynthesisTryptophan biosynthesis protein trpCFIndole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]Indole-3-glycerol-phosphate synthase activityPhosphoribosylanthranilate isomerase activity 3.20.20.70 261 10 81 4.03 4.94
1nsjA00 75.98 Thermotoga maritimaN-(5'-phosphoribosyl)anthranilate isomerasePhenylalanine, tyrosine and tryptophan biosynthesisPhosphoribosylanthranilate isomerase [EC:5.3.1.24]Metabolic pathways 3.20.20.70 205 10 73 3.14 4.25
2w79A00 75.90 Histidine metabolismMetabolic pathwaysThermotoga maritima1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerasePhosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] 3.20.20.70 241 14 75 3.54 4.69
2yw3E00 75.52 Arginine and proline metabolism2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]Glyoxylate and dicarboxylate metabolismMetabolic pathwaysThermus thermophilus HB8 3.20.20.70 198 14 72 3.41 4.73
1piiA02 75.15 Phenylalanine, tyrosine and tryptophan biosynthesisTryptophan biosynthesis protein trpCFIndole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]Phosphoribosylanthranilate isomerase activityIndole-3-glycerol-phosphate synthase activity 3.20.20.70 190 12 71 3.43 4.81
3cu2A00 74.99 Pentose and glucuronate interconversionsPentose phosphate pathwayHaemophilus somnus 129PTRibulose-5-phosphate 3-epimeraseRibulose-phosphate 3-epimerase [EC:5.1.3.1] 3.20.20.70 232 9 80 3.96 4.93
3elfA00 73.63 Pentose phosphate pathwayGlycolysis / GluconeogenesisFructose and mannose metabolismMetabolic pathwaysFructose-bisphosphate aldolase 3.20.20.70 329 9 73 3.57 4.87
Displaying entries 1 to 20 (page 1 of 1)


Domain ATOM Sequence

>pdb|1qopA00
MERYENLFAQLNDRREGAFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQ
CFEMLAIIREKHPTIPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVADVPVEESAPFRQAALRHNIAPIFICPPNADD
DLLRQVASYGRGYTYLLSRSGVTGAENRGPLHHLIEKLKEYHAAPALQGFGISSPEQVSAAVRAGAAGAISGSAIVKIIE
KNLASPKQMLAELRSFVSAMKAASR    

Domain COMBS Sequence

>pdb|1qopA00
MERYENLFAQLNDRREGAFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQ
CFEMLAIIREKHPTIPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVADVPVEESAPFRQAALRHNIAPIFICPPNADD
DLLRQVASYGRGYTYLLSRSGVTGAENRGALPLHHLIEKLKEYHAAPALQGFGISSPEQVSAAVRAGAAGAISGSAIVKI
IEKNLASPKQMLAELRSFVSAMKAASRA    

Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:54

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:54

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:19

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"