CATH Domain: 1qmhA02 XML data for domain: 1qmhA02

Molscript image for 1qmhA02
1qmhA02
PDB coordinates for domain 1qmhA02

PDB 1qmh, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.360 Dihydrodipicolinate Reductase; domain 2
3.30.360.20 Gene3D
3.30.360.20.1
3.30.360.20.1.1
3.30.360.20.1.1.1
3.30.360.20.1.1.1.1
3.30.360.20.1.1.1.1.5

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Segment boundaries for domain 1qmhA02

Chopping figure for domain 1qmhA02
DomainStart PDB ResidueStop PDB Residue
1qmhA01 5 182
1qmhA01 277 337
1qmhA02 186 276

Structural Neighbourhood (7 entries)

There are 7 matching structural neighberhood comparisons for CATH ID 3.30.360.20.1.1.1.1.5 (SIMAX score < 5)

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Displaying entries 1 to 7 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2okaA00 80.78 Pseudomonas aeruginosaSelenoprotein W-related proteinPutative uncharacterized protein 3.40.30.10 84 10 82 3.01 3.65
3dexH00 80.64 Streptomyces avermitilisSelenoprotein W-related proteinPutative uncharacterized protein 3.40.30.10 83 12 83 2.95 3.53
1l4sA01 79.42 Ribosome-associated inhibitor ARibosome-associated inhibitor ACytosolic small ribosomal subunitEscherichia coli K-12 3.30.160.100 91 6 61 2.69 4.37
2p0gB00 79.29 Vibrio choleraeSelenoprotein W-related proteinSelenoprotein W-related protein 3.40.30.10 79 8 78 3.89 4.99
2rqlA00 78.93 Protein bindingPutative sigma-54 modulation proteinEscherichia coli K-12Probable sigma(54) modulation protein 3.30.160.100 95 7 58 2.65 4.50
2fa8B00 77.97 Agrobacterium tumefaciens str. C58Selenoprotein W-related proteinPutative uncharacterized protein 3.40.30.10 86 6 81 3.20 3.94
2in3A01 74.43 Nitrosomonas europaeaPutative protein-disulfide isomerasePutative uncharacterized protein 3.40.30.10 78 10 76 3.84 4.99
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Displaying entries 1 to 7 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1qmhA02
RGNIVQMRGEVLLAGVPRHVAEREIATLAGSFSLHEQNIHNLPRDQGPGNTVSLEVESENITERFFVVGEKRVSAEVVAA
QLVKEVKRYLA
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1qmhA02
RGNIVQMRGEVLLAGVPRHVAEREIATLAGSFSLHEQNIHNLPRDQGPGNTVSLEVESENITERFFVVGEKRVSAEVVAA
QLVKEVKRYLA
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:03

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:03

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:37

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"