CATH Domain: 1qlwA00 XML data for domain: 1qlwA00

Molscript image for 1qlwA00
1qlwA00
PDB coordinates for domain 1qlwA00

PDB 1qlw, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.1820 Gene3D
3.40.50.1820.2
3.40.50.1820.2.1
3.40.50.1820.2.1.1
3.40.50.1820.2.1.1.1
3.40.50.1820.2.1.1.1.1

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Segment boundaries for domain 1qlwA00

Chopping figure for domain 1qlwA00
DomainStart PDB ResidueStop PDB Residue
1qlwA00 5 322

Structural Neighbourhood (7 entries)

There are 7 matching structural neighberhood comparisons for CATH ID 3.40.50.1820.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 7 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3i28A03 76.02 PeroxisomeSoluble epoxide hydrolase [EC:3.3.2.10]Arachidonic acid metabolismEpoxide hydrolase activityEpoxide hydrolase 2 3.40.50.1820 312 9 61 2.75 4.46
2o2gA00 75.53 Dienelactone hydrolaseAnabaena variabilis ATCC 29413 3.40.50.1820 210 16 62 3.14 4.99
1jfrA00 75.43 Triacylglycerol acylhydrolaseStreptomyces sp. 3.40.50.1820 260 13 62 3.08 4.95
3fnbA02 75.41 Streptococcus mutansPutative uncharacterized protein 3.40.50.1820 245 9 62 3.03 4.84
1ufoA00 75.33 HydrolaseThermus thermophilus 3.40.50.1820 234 11 62 2.84 4.54
1imjA00 74.94 Abhydrolase domain-containing protein 14BHomo sapiensAbhydrolase domain-containing protein 14 3.40.50.1820 208 20 63 3.13 4.90
1thtA00 74.44 Acyl transferaseVibrio harveyi 3.40.50.1820 294 7 61 2.97 4.79
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Displaying entries 1 to 7 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1qlwA00
VPKTPAGPLTLSGQGSFFVGGRDVTSETLSLSPKYDAHGTVTVDQMYVRYQIPQRAKRYPITLIHGCCLTGMTWETTPDG
RMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQA
QAELWQQMVPDWLGSMPTPNPTVANLSKLAIKLDGTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGECPKPEDVKPLT
SIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRNTA
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1qlwA00
APPPVPKTPAGPLTLSGQGSFFVGGRDVTSETLSLSPKYDAHGTVTVDQMYVRYQIPQRAKRYPITLIHGCCLTGMTWET
TPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQF
PVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKLDGTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGECPKPEDV
KPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRN
TAKPAHGR
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:21

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:21

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:44

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"