CATH Domain: 1qhqA00 XML data for domain: 1qhqA00

Molscript image for 1qhqA00
1qhqA00
PDB coordinates for domain 1qhqA00

PDB 1qhq, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.40 Immunoglobulin-like
2.60.40.420 Cupredoxins - blue copper proteins Gene3D
2.60.40.420.11
2.60.40.420.11.1
2.60.40.420.11.1.1
2.60.40.420.11.1.1.1
2.60.40.420.11.1.1.1.1

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Segment boundaries for domain 1qhqA00

Chopping figure for domain 1qhqA00
DomainStart PDB ResidueStop PDB Residue
1qhqA00 2 140

Structural Neighbourhood (6 entries)

There are 6 matching structural neighberhood comparisons for CATH ID 2.60.40.420.11.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 6 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1ibyA00 80.15 Chain A, Red Copper Protein NitrosocyaninNitrosomonas europaea 2.60.40.420 112 12 65 1.89 2.89
1v54B02 79.11 Cardiac muscle contractionParkinson's diseaseOxidative phosphorylationCytochrome c oxidase subunit 2Alzheimer's disease 2.60.40.420 136 13 66 2.44 3.69
3cvbA00 78.31 PlastocyaninPhormidium laminosum 2.60.40.420 102 23 69 3.42 4.90
2gsmB02 78.29 Rhodobacter sphaeroidesOxidative phosphorylationCytochrome c oxidase subunit 2Cytochrome c oxidase subunit II [EC:1.9.3.1]Metabolic pathways 2.60.40.420 153 13 59 2.30 3.87
1sddA02 74.85 Coagulation factor VBos taurusCoagulation factor V (labile factor)Complement and coagulation cascades 2.60.40.420 101 9 53 2.47 4.58
2qt6A02 74.81 LaccaseLentinus tigrinus 2.60.40.420 176 5 56 2.78 4.94
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Displaying entries 1 to 6 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1qhqA00
ANAPGGSNVVNETPAQTVEVRAAPDALAFAQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNAD
ALFVPPPDTPNALAWTAMLNAGESGSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVTP
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1qhqA00
AANAPGGSNVVNETPAQTVEVRAAPDALAFAQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNA
DALFVPPPDTPNALAWTAMLNAGESGSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVTP
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:43

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:43

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:02

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"