CATH Domain: 1qd5A00 XML data for domain: 1qd5A00

Molscript image for 1qd5A00
1qd5A00
PDB coordinates for domain 1qd5A00

PDB 1qd5, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.40 Beta Barrel
2.40.230 Outer membrane phospholipase (ompla); Chain C
2.40.230.10 Outer membrane phospholipase (ompla).Chain C Gene3D
2.40.230.10.1
2.40.230.10.1.1
2.40.230.10.1.1.1
2.40.230.10.1.1.1.1
2.40.230.10.1.1.1.1.1

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Segment boundaries for domain 1qd5A00

Chopping figure for domain 1qd5A00
DomainStart PDB ResidueStop PDB Residue
1qd5A00 13 269

Structural Neighbourhood (0 entries)

Sorry, we could not find any non-redundant representatives with similar structural scores to this domain in CATH.


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Domain ATOM Sequence 

>pdb|1qd5A00
AVRGSIIANMLQEHDNPFTLYPYDTNYLIYTQTSDLNKEAIASYDWAENARKDEVKFQLSLAFPLWRGILGPNSVLGASY
TQKSWWQLSNSEESSPFRETNYEPQLFLGFATDYRFAGWTLRDVEMGYNHDSNGRSDPTSRSWNRLYTRLMAENGNWLVE
VKPWYVVGNTDDNPDITKYMGYYQLKIGYHLGDAVLSAKGQYNWNTGYGGAELGLSYPITKHVRLYTQVYSGYGESLIDY
NFNQTRVGVGVMLNDLF
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1qd5A00
AVRGSIIANMLQEHDNPFTLYPYDTNYLIYTQTSDLNKEAIASYDWAENARKDEVKFQLSLAFPLWRGILGPNSVLGASY
TQKSWWQLSNSEESSPFRETNYEPQLFLGFATDYRFAGWTLRDVEMGYNHDSNGRSDPTSRSWNRLYTRLMAENGNWLVE
VKPWYVVGNTDDNPDITKYMGYYQLKIGYHLGDAVLSAKGQYNWNTGYGGAELGLSYPITKHVRLYTQVYSGYGESLIDY
NFNQTRVGVGVMLNDLF
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:34

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:34

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:56

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"