CATH Domain: 1qcsA01 XML data for domain: 1qcsA01

Molscript image for 1qcsA01
1qcsA01
PDB coordinates for domain 1qcsA01

PDB 1qcs, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.40 Beta Barrel
2.40.40 Barwin-like endoglucanases
2.40.40.20 Gene3D
2.40.40.20.9
2.40.40.20.9.1
2.40.40.20.9.1.1
2.40.40.20.9.1.1.1
2.40.40.20.9.1.1.1.1

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Segment boundaries for domain 1qcsA01

Chopping figure for domain 1qcsA01
DomainStart PDB ResidueStop PDB Residue
1qcsA01 2 83
1qcsA02 84 195

Structural Neighbourhood (7 entries)

There are 7 matching structural neighberhood comparisons for CATH ID 2.40.40.20.9.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 7 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1cr5A01 92.19 Mating projection tipVesicular-fusion protein SEC18Vacuole fusion, non-autophagicATPase activityER to Golgi vesicle-mediated transport 2.40.40.20 77 28 93 1.27 1.35
1e32A01 88.60 Mus musculusPolyubiquitin bindingProtein complexAggresome assemblyTransitional endoplasmic reticulum ATPase 2.40.40.20 87 8 89 2.20 2.45
1wlfA01 87.63 Mus musculusPeroxisome biogenesis factor 1 2.40.40.20 84 9 90 1.96 2.17
1cz4A01 84.09 VCP-like ATPaseTransitional endoplasmic reticulum ATPaseThermoplasma acidophilum 2.40.40.20 92 17 84 2.46 2.90
1i50A03 81.33 Pyrimidine metabolismDNA-directed RNA polymerase II subunit A [EC:2.7.7.6]Purine metabolismRNA polymeraseProtein binding 2.40.40.20 101 8 74 2.28 3.07
1yleA02 80.75 Arginine and proline metabolismArginine N-succinyltransferase [EC:2.3.1.109]Pseudomonas aeruginosaArginine N-succinyltransferase subunit alpha 2.40.40.20 65 13 74 2.95 3.98
2c45A00 76.76 Beta-Alanine metabolismPantothenate and CoA biosynthesisMetabolic pathwaysAspartate 1-decarboxylase [EC:4.1.1.11]Aspartate 1-decarboxylase 2.40.40.20 113 8 66 3.29 4.96
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Displaying entries 1 to 7 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1qcsA01
AGRSQAARCPTDELSLSNCAVVSEKDYQSGQHVIVRTSPNHKYIFTLRTHPSVVPGSVAFSLPQRKWAGLSIGQEIEVAL
Y
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1qcsA01
AGRSXQAARCPTDELSLSNCAVVSEKDYQSGQHVIVRTSPNHKYIFTLRTHPSVVPGSVAFSLPQRKWAGLSIGQEIEVA
LY
BLAST against CATH

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Domain History Events (2)

Domain assigned by lewis on 18 Jan 2007 20:24

Reassigning this domain to its previous classification as part of fragment fixing process in preparation for release v3.1.0.

Insertion by lewis on 18 Jan 2007 20:24

Rechopping chains just before release v3.1.0 in order to fix missing fragments.