CATH Domain: 1q9bA00 XML data for domain: 1q9bA00

Molscript image for 1q9bA00
1q9bA00
PDB coordinates for domain 1q9bA00

PDB 1q9b, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.60 Wheat Germ Agglutinin (Isolectin 2); domain 1
3.30.60.10 Gene3D
3.30.60.10.2
3.30.60.10.2.6
3.30.60.10.2.6.1
3.30.60.10.2.6.1.1
3.30.60.10.2.6.1.1.1

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Segment boundaries for domain 1q9bA00

Chopping figure for domain 1q9bA00
DomainStart PDB ResidueStop PDB Residue
1q9bA00 1 43

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 3.30.60.10.2.6.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1wgtA04 97.70 Agglutinin isolectin 3Triticum aestivum 3.30.60.10 43 100 97 0.30 0.31
1p0t100 71.67 Tumor necrosis factor receptor superfamily member 13CTumor necrosis factor receptor superfamily, member 13CCytokine-cytokine receptor interactionIntestinal immune network for IgA productionPrimary immunodeficiency 2.10.50.10 24 12 54 2.65 4.84
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1q9bA00
EQCGRQAGGKLCPNNLCCSQWGWCGSTDEYCSPDHNCQSNCKD
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1q9bA00
EQCGRQAGGKLCPNNLCCSQWGWCGSTDEYCSPDHNCQSNCKD
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:58

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:58

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:25

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"