CATH Domain: 1q7fB00 XML data for domain: 1q7fB00

Molscript image for 1q7fB00
1q7fB00
PDB coordinates for domain 1q7fB00

PDB 1q7f, Chain B, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.120 6 Propellor
2.120.10 Neuraminidase
2.120.10.30 TolB, C-terminal domain Gene3D
2.120.10.30.7
2.120.10.30.7.1
2.120.10.30.7.1.1
2.120.10.30.7.1.1.1
2.120.10.30.7.1.1.1.1

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Segment boundaries for domain 1q7fB00

Chopping figure for domain 1q7fB00
DomainStart PDB ResidueStop PDB Residue
1q7fB00 756 1037

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 2.120.10.30.7.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1rwiA00 83.79 Serine/threonine protein kinase, bacterial [EC:2.7.11.1]Serine/threonine-protein kinase pknDMycobacterium tuberculosis 2.120.10.30 256 16 89 3.68 4.12
1npeA00 81.78 Mus musculusCell-matrix adhesionNidogen-1Collagen bindingBasement membrane 2.120.10.30 263 11 82 4.05 4.92
1pguB01 76.99 Mating projection tipResponse to osmotic stressNucleusActin bindingActin filament depolymerization 2.130.10.10 279 8 83 4.07 4.86
1v04A00 76.43 2.120.10.30 332 8 78 3.57 4.58
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1q7fB00
KSQIKRQRMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAV
VRNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLE
FPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISAL
ESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQLAPVGM
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1q7fB00
GTHMKSQIKRQRMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPN
RVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCS
KHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQL
ISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQLAPVGM
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:48

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:48

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:10

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"