CATH Domain: 1q6zA03 XML data for domain: 1q6zA03

Molscript image for 1q6zA03
1q6zA03
PDB coordinates for domain 1q6zA03

PDB 1q6z, Chain A, Domain 3

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.970 Gene3D
3.40.50.970.1
3.40.50.970.1.1
3.40.50.970.1.1.1
3.40.50.970.1.1.1.1
3.40.50.970.1.1.1.1.1

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Segment boundaries for domain 1q6zA03

Chopping figure for domain 1q6zA03
DomainStart PDB ResidueStop PDB Residue
1q6zA01 2 179
1q6zA02 180 341
1q6zA03 342 525

Structural Neighbourhood (13 entries)

There are 13 matching structural neighberhood comparisons for CATH ID 3.40.50.970.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 13 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1ybhA03 88.37 ChloroplastAcetolactate synthase I/II/III large subunit [EC:2.2.1.6]Acetolactate synthase, chloroplasticValine, leucine and isoleucine biosynthesisMetabolic pathways 3.40.50.970 194 22 93 1.79 1.92
2wvgA03 88.01 Indolepyruvate decarboxylase [EC:4.1.1.74]Zymomonas mobilisMetabolic pathwaysTryptophan metabolismPyruvate decarboxylase 3.40.50.970 194 20 90 2.10 2.31
1v5eA03 87.60 3.40.50.970 190 22 96 2.13 2.21
1ozhB03 87.13 Acetolactate synthase, catabolicKlebsiella pneumoniae 3.40.50.970 196 22 90 1.93 2.13
2ihtA03 87.09 Streptomyces clavuligerusCarboxyethylarginine synthase 3.40.50.970 210 26 87 2.07 2.38
1t9bA03 85.37 Acetolactate synthase I/II/III large subunit [EC:2.2.1.6]Metabolic pathwaysValine, leucine and isoleucine biosynthesisButanoate metabolismFlavin adenine dinucleotide binding 3.40.50.970 228 29 80 1.96 2.44
2vk8A03 85.28 NucleusPyruvate decarboxylase activityPyruvate metabolic processProtein bindingMetabolic pathways 3.40.50.970 202 17 88 2.59 2.92
2uz1A01 81.08 Benzaldehyde lyasePseudomonas fluorescens 3.40.50.970 182 15 84 4.04 4.80
1ozhD01 79.26 Acetolactate synthase, catabolicKlebsiella pneumoniae 3.40.50.970 176 9 81 3.90 4.78
2vk8A01 78.87 NucleusPyruvate metabolic processPyruvate decarboxylase activityProtein bindingMetabolic pathways 3.40.50.970 187 5 79 3.80 4.77
2ozlB01 78.64 Pyruvate dehydrogenase (acetyl-transferring) activityPyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]Citrate cycle (TCA cycle)Pyruvate dehydrogenase E1 component subunit beta, mitochondrialTricarboxylic acid cycle 3.40.50.970 193 15 78 3.57 4.53
2bfdB01 78.05 Mitochondrial alpha-ketoglutarate dehydrogenase complexCarboxy-lyase activityValine, leucine and isoleucine degradationMetabolic pathwaysBranched chain family amino acid catabolic process 3.40.50.970 197 11 79 3.75 4.71
1yd7A00 77.58 Pyrococcus furiosus2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3]Citrate cycle (TCA cycle)2-keto acid:ferredoxin oxidoreductase subunit alphaMetabolic pathways 3.40.50.970 162 9 69 3.41 4.94
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Displaying entries 1 to 13 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1q6zA03
EPAKVDQDAGRLHPETVFDTLNDMAPENAIYLNESTSTTAQMWQRLNMRNPGSYYFCAAGGLGFALPAAIGVQLAEPERQ
VIAVIGDGSANYSISALWTAAQYNIPTIFVIMNNGTYGALRWFAGVLEAENVPGLDVPGIDFRALAKGYGVQALKADNLE
QLKGSLQEALSAKGPVLIEVSTVS
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1q6zA03
EPAKVDQDAGRLHPETVFDTLNDMAPENAIYLNESTSTTAQMWQRLNMRNPGSYYFCAAGGLGFALPAAIGVQLAEPERQ
VIAVIGDGSANYSISALWTAAQYNIPTIFVIMNNGTYGALRWFAGVLEAENVPGLDVPGIDFRALAKGYGVQALKADNLE
QLKGSLQEALSAKGPVLIEVSTVSPVK
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 18:30

Assigning to "3.40.50.970" based on similarity with "1po7A03" (NWSI: 100, NWO: 100, SPS: 99.53, SPO: 100, RMSD: 0.11)

Flow stage update by auto on 28 Apr 2006 17:50

NW result present for Domain "1q6zA03"

Flow stage update by auto on 28 Apr 2006 17:44

All required files are present for Domain "1q6zA03"

Flow stage update by auto on 27 Apr 2006 17:31

Beginning processing for Domain "1q6zA03"

Insertion by auto on 08 Mar 2006 23:10

Final ChopClose added based on similarity with "1po7A" [LEE: 0, LME: 0, MR: 0, LG: 0, SS: 99.38, SI: 100, SO: 100]