CATH Domain: 1q6zA01 XML data for domain: 1q6zA01

Molscript image for 1q6zA01
1q6zA01
PDB coordinates for domain 1q6zA01

PDB 1q6z, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.970 Gene3D
3.40.50.970.3
3.40.50.970.3.1
3.40.50.970.3.1.1
3.40.50.970.3.1.1.1
3.40.50.970.3.1.1.1.1

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Segment boundaries for domain 1q6zA01

Chopping figure for domain 1q6zA01
DomainStart PDB ResidueStop PDB Residue
1q6zA01 2 179
1q6zA02 180 341
1q6zA03 342 525

Structural Neighbourhood (10 entries)

There are 10 matching structural neighberhood comparisons for CATH ID 3.40.50.970.3.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 10 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1t9bB01 89.57 Acetolactate synthase I/II/III large subunit [EC:2.2.1.6]Metabolic pathwaysValine, leucine and isoleucine biosynthesisButanoate metabolismFlavin adenine dinucleotide binding 3.40.50.970 185 27 94 1.73 1.83
2uz1A01 89.53 Benzaldehyde lyasePseudomonas fluorescens 3.40.50.970 182 22 97 1.91 1.96
1ozhD01 89.49 Acetolactate synthase, catabolicKlebsiella pneumoniae 3.40.50.970 176 20 94 1.76 1.85
2ez9A01 88.91 Pyruvate oxidase [EC:1.2.3.3]Lactobacillus plantarumPyruvate metabolismPyruvate oxidaseMetabolic pathways 3.40.50.970 184 17 95 1.62 1.69
2vk8A01 88.21 NucleusPyruvate metabolic processPyruvate decarboxylase activityProtein bindingMetabolic pathways 3.40.50.970 187 19 94 1.95 2.07
2ihuA01 88.21 Streptomyces clavuligerusCarboxyethylarginine synthase 3.40.50.970 185 21 95 2.42 2.53
2wvgA01 87.74 Indolepyruvate decarboxylase [EC:4.1.1.74]Zymomonas mobilisTryptophan metabolismMetabolic pathwaysPyruvate decarboxylase 3.40.50.970 185 16 94 1.98 2.11
1yd7A00 82.92 Pyrococcus furiosus2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3]Citrate cycle (TCA cycle)2-keto acid:ferredoxin oxidoreductase subunit alphaMetabolic pathways 3.40.50.970 162 12 81 3.10 3.81
2ozlB01 80.87 Pyruvate dehydrogenase (acetyl-transferring) activityPyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]Citrate cycle (TCA cycle)Pyruvate dehydrogenase E1 component subunit beta, mitochondrialTricarboxylic acid cycle 3.40.50.970 193 12 85 3.82 4.47
2bfdB01 80.13 Mitochondrial alpha-ketoglutarate dehydrogenase complexCarboxy-lyase activityValine, leucine and isoleucine degradationMetabolic pathwaysBranched chain family amino acid catabolic process 3.40.50.970 197 12 86 3.77 4.37
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Displaying entries 1 to 10 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1q6zA01
ASVHGTTYELLRRQGIDTVFGNPGSNALPFLKDFPEDFRYILALQEACVVGIADGYAQASRKPAFINLHSAAGTGNAMGA
LSNAWNSHSPLIVTAGQQTRAMIGVEALLTNVDAANLPRPLVKWSYEPASAAEVPHAMSRAIHMASMAPQGPVYLSVPYD
DWDKDADPQSHHLFDRHV
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1q6zA01
MASVHGTTYELLRRQGIDTVFGNPGSNALPFLKDFPEDFRYILALQEACVVGIADGYAQASRKPAFINLHSAAGTGNAMG
ALSNAWNSHSPLIVTAGQQTRAMIGVEALLTNVDAANLPRPLVKWSYEPASAAEVPHAMSRAIHMASMAPQGPVYLSVPY
DDWDKDADPQSHHLFDRHV
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 18:30

Assigning to "3.40.50.970" based on similarity with "1po7A01" (NWSI: 100, NWO: 100, SPS: 99.70, SPO: 100, RMSD: 0.09)

Flow stage update by auto on 28 Apr 2006 17:50

NW result present for Domain "1q6zA01"

Flow stage update by auto on 28 Apr 2006 17:44

All required files are present for Domain "1q6zA01"

Flow stage update by auto on 27 Apr 2006 17:31

Beginning processing for Domain "1q6zA01"

Insertion by auto on 08 Mar 2006 23:10

Final ChopClose added based on similarity with "1po7A" [LEE: 0, LME: 0, MR: 0, LG: 0, SS: 99.38, SI: 100, SO: 100]