CATH Domain: 1q5nA03 XML data for domain: 1q5nA03

Molscript image for 1q5nA03
1q5nA03
PDB coordinates for domain 1q5nA03

PDB 1q5n, Chain A, Domain 3

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.40 Ribonucleotide Reductase Protein R1; domain 1
1.10.40.30 Fumarase/aspartase (C-terminal domain) Gene3D
1.10.40.30.8
1.10.40.30.8.1
1.10.40.30.8.1.1
1.10.40.30.8.1.1.1
1.10.40.30.8.1.1.1.1

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Segment boundaries for domain 1q5nA03

Chopping figure for domain 1q5nA03
DomainStart PDB ResidueStop PDB Residue
1q5nA01 7 105
1q5nA02 106 361
1q5nA03 363 443

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 1.10.40.30.8.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1jswB03 80.39 Nitrogen metabolismMetabolic pathwaysAlanine, aspartate and glutamate metabolismMembraneProtein binding 1.10.40.30 50 16 61 1.85 3.00
1j3uA03 80.31 Bacillus sp. YM55-1Aspartase 1.10.40.30 52 13 64 1.85 2.88
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1q5nA03
THGLIMAEAVMMALAPHMGRLNAHHVVEAACKTAVAEQKHLKDIISQVDEVKQYFNPSQLDEIFKPESYLGNIQDQIDAV
L
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1q5nA03
THGLIMAEAVMMALAPHMGRLNAHHVVEAACKTAVAEQKHLKDIISQVDEVKQYFNPSQLDEIFKPESYLGNIQDQIDAV
L
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:04

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:04

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:34

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"