CATH Domain: 1q5nA01 XML data for domain: 1q5nA01

Molscript image for 1q5nA01
1q5nA01
PDB coordinates for domain 1q5nA01

PDB 1q5n, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.275 Fumarase C; Chain B, domain 1
1.10.275.10 Fumarase/aspartase (N-terminal domain) Gene3D
1.10.275.10.9
1.10.275.10.9.1
1.10.275.10.9.1.1
1.10.275.10.9.1.1.1
1.10.275.10.9.1.1.1.1

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Segment boundaries for domain 1q5nA01

Chopping figure for domain 1q5nA01
DomainStart PDB ResidueStop PDB Residue
1q5nA01 7 105
1q5nA02 106 361
1q5nA03 363 443

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 1.10.275.10.9.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1dofA02 86.84 Pyrobaculum aerophilumAdenylosuccinate lyase [EC:4.3.2.2]Purine metabolismAdenylosuccinate lyase (PurB)Alanine, aspartate and glutamate metabolism 1.10.275.10 85 21 79 2.07 2.59
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1q5nA01
SLFYQRDVTEIFSDRALVSYMVEAEVALAQAQAQVGVIPQSAATVIQRAAKTAIDKIDFDALATATGLAGNIAIPFVKQL
TAIVKDADEDAARYVHWGA
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1q5nA01
SLFYQRDVTEIFSDRALVSYMVEAEVALAQAQAQVGVIPQSAATVIQRAAKTAIDKIDFDALATATGLAGNIAIPFVKQL
TAIVKDADEDAARYVHWGA
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:07

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:07

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:34

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"