CATH Domain: 1q4uB00 XML data for domain: 1q4uB00

Molscript image for 1q4uB00
1q4uB00
PDB coordinates for domain 1q4uB00

PDB 1q4u, Chain B, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.10 Roll
3.10.129 Thiol Ester Dehydrase; Chain A
3.10.129.10 Gene3D
3.10.129.10.4
3.10.129.10.4.1
3.10.129.10.4.1.1
3.10.129.10.4.1.1.1
3.10.129.10.4.1.1.1.1

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Segment boundaries for domain 1q4uB00

Chopping figure for domain 1q4uB00
DomainStart PDB ResidueStop PDB Residue
1q4uB00 12 150

Structural Neighbourhood (28 entries)

There are 28 matching structural neighberhood comparisons for CATH ID 3.10.129.10.4.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 28 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1wluA00 88.62 Thermus thermophilus HB8Phenylacetic acid degradation protein PaaIPhenylacetic acid degradation protein 3.10.129.10 117 23 83 1.77 2.12
2fs2B00 87.82 Acyl-coenzyme A thioesterase paaIPhenylacetic acid degradation proteinEscherichia coli K-12 3.10.129.10 134 18 89 2.80 3.11
1zkiA00 86.94 Pseudomonas aeruginosaPhenylacetic acid degradation proteinPutative uncharacterized protein 3.10.129.10 118 22 84 2.36 2.78
2pimA00 86.93 Ralstonia eutropha JMP134Phenylacetic acid degradation-related protein 3.10.129.10 127 21 89 3.21 3.57
1yocA00 86.45 Pseudomonas aeruginosaPutative uncharacterized protein 3.10.129.10 145 14 93 4.29 4.61
2qwzA01 86.18 Phenylacetic acid degradation-related proteinRuegeria sp. TM1040 3.10.129.10 128 18 92 3.20 3.48
1ixlA00 86.02 Putative uncharacterized protein PH1136Pyrococcus horikoshii 3.10.129.10 127 18 87 3.09 3.52
1t82A00 85.74 Shewanella oneidensisPutative uncharacterized protein 3.10.129.10 138 11 90 3.17 3.50
1sh8B00 85.29 Pseudomonas aeruginosaPutative uncharacterized protein 3.10.129.10 149 17 90 4.29 4.73
1z6bC00 84.55 Fatty acid biosynthesisMetabolic pathways3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-]Plasmodium falciparumBeta-hydroxyacyl-ACP dehydratase 3.10.129.10 138 10 87 2.80 3.22
2hboA01 84.51 Caulobacter vibrioidesPutative uncharacterized protein 3.10.129.10 126 11 84 2.68 3.18
3bjkD00 84.16 Acyl-CoA thioesterase YciA [EC:3.1.2.-]Haemophilus influenzaeBiosynthesis of unsaturated fatty acidsUncharacterized acyl-CoA thioester hydrolase HI_0827 3.10.129.10 139 7 75 2.25 2.98
3b7kA02 83.92 Acetyl-CoA hydrolase [EC:3.1.2.1]Pyruvate metabolismHomo sapiensAcyl-coenzyme A thioesterase 12 3.10.129.10 121 13 76 3.53 4.59
1c8uA02 83.81 Biosynthesis of unsaturated fatty acidsAcyl-CoA thioesterase II [EC:3.1.2.-]Acyl-CoA thioesterase 2Acyl-CoA thioesterase activityFatty acid catabolic process 3.10.129.10 115 15 80 3.49 4.33
2prxA00 83.62 Shewanella loihica PV-4Thioesterase superfamily protein 3.10.129.10 108 12 77 2.63 3.38
3b7kC02 83.58 Acetyl-CoA hydrolase [EC:3.1.2.1]Pyruvate metabolismHomo sapiensAcyl-coenzyme A thioesterase 12 3.10.129.10 110 14 71 1.64 2.28
1tbuB00 83.57 Palmitoyl-CoA hydrolase [EC:3.1.2.2]Protein bindingBiosynthesis of unsaturated fatty acidsPeroxisomal acyl-coenzyme A thioester hydrolase 1Peroxisome 3.10.129.10 98 13 69 1.73 2.50
1njkA00 83.31 Long-chain acyl-CoA thioesterase tesCAcyl-CoA thioesterase activityThioesterase III [EC:3.1.2.-]Fatty acid beta-oxidationEscherichia coli K-12 3.10.129.10 130 6 75 2.63 3.48
2ov9A01 83.09 Rhodococcus jostii RHA1Putative uncharacterized protein 3.10.129.10 142 12 88 3.37 3.80
2oiwA00 82.93 Geobacillus kaustophilusHypothetical conserved protein 3.10.129.10 129 7 74 2.58 3.45
3ck1A00 82.91 Ubiquinone and other terpenoid-quinone biosynthesisRalstonia eutropha JMP1344-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]2,4-Dichlorobenzoate degradationMetabolic pathways 3.10.129.10 138 8 76 3.01 3.91
2nujA01 82.84 Jannaschia sp. CCS1Thioesterase superfamily 3.10.129.10 145 10 76 3.37 4.40
2essA01 82.68 Bacteroides thetaiotaomicronAcyl-ACP thioesterase 3.10.129.10 138 7 78 3.37 4.30
2aliA00 81.54 Pseudomonas aeruginosaPutative uncharacterized protein 3.10.129.10 126 9 75 2.98 3.94
2hljA01 81.14 Pseudomonas putida KT2440Putative uncharacterized protein 3.10.129.10 132 9 76 3.18 4.13
3b7kB01 80.83 Acetyl-CoA hydrolase [EC:3.1.2.1]Pyruvate metabolismHomo sapiensAcyl-coenzyme A thioesterase 12 3.10.129.10 140 8 74 2.94 3.96
1mkaA00 80.37 Fatty acid biosynthesisMetabolic pathways3-hydroxydecanoyl-[acyl-carrier-protein] dehydrataseFatty acid biosynthetic process3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.60] 3.10.129.10 171 10 77 3.06 3.96
1s9cL01 79.16 Sterol bindingPeroxisomeEstradiol 17-beta-dehydrogenase activityPrimary bile acid biosynthesisSterol transporter activity 3.10.129.10 140 7 70 3.24 4.63
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Displaying entries 1 to 28 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1q4uB00
GGNLPDVASHYPVAYEQTLDGTVGFVIDEMTPERATASVEVTDTLRQRWGLVHGGAYCALAEMLATEATVAVVHEKGMMA
VGQSNHTSFFRPVKEGHVRAEAVRIHAGSTTWFWDVSLRDDAGRLCAVSSMSIAVRPRR
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1q4uB00
MHRTSNGSHATGGNLPDVASHYPVAYEQTLDGTVGFVIDEMTPERATASVEVTDTLRQRWGLVHGGAYCALAEMLATEAT
VAVVHEKGMMAVGQSNHTSFFRPVKEGHVRAEAVRIHAGSTTWFWDVSLRDDAGRLCAVSSMSIAVRPRRD
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:51

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:51

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:14

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"