CATH Domain: 1q35A01 XML data for domain: 1q35A01

Molscript image for 1q35A01
1q35A01
PDB coordinates for domain 1q35A01

PDB 1q35, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.190 D-Maltodextrin-Binding Protein; domain 2
3.40.190.10 Periplasmic binding protein-like II Gene3D
3.40.190.10.2
3.40.190.10.2.1
3.40.190.10.2.1.1
3.40.190.10.2.1.1.1
3.40.190.10.2.1.1.1.1

Segment boundaries for domain 1q35A01

Chopping figure for domain 1q35A01
DomainStart PDB ResidueStop PDB Residue
1q35A01 1 98
1q35A01 227 275
1q35A02 99 226
1q35A02 276 318

Structural Neighbourhood (18 entries)

There are 18 matching structural neighberhood comparisons for CATH ID 3.40.190.10.2.1.1.1.1 (SIMAX score < 5)

Displaying entries 1 to 18 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3e13X01 93.25 Putative iron-uptake ABC transport system,periplasmic iron-binding proteinCampylobacter jejuniProtein bindingIron(III) transport system substrate-binding proteinABC transporters 3.40.190.10 148 38 97 1.85 1.90
1xvxA01 88.87 Yersinia enterocolitica (type O:8)YfuA 3.40.190.10 155 26 92 1.80 1.95
1nnfA02 88.69 ABC transportersHaemophilus influenzaeIron-utilization periplasmic proteinIron(III) transport system substrate-binding protein 3.40.190.10 152 27 93 2.47 2.64
1atgA01 85.91 Azotobacter vinelandiiBinding protein 3.40.190.10 122 20 81 2.69 3.30
3gzgA01 85.33 Molybdate transport system substrate-binding proteinMolybdate-binding periplasmic protein; permeaseABC transportersXanthomonas axonopodis pv. citri 3.40.190.10 120 21 80 2.44 3.04
3c9hA01 83.52 Agrobacterium tumefaciens str. C58ABC transporter, substrate binding protein (Iron)Iron(III) transport system substrate-binding proteinABC transporters 3.40.190.10 189 18 74 2.06 2.76
1potA01 83.45 ABC transportersOuter membrane-bounded periplasmic spacePolyamine transportPolyamine-transporting ATPase activitySpermidine/putrescine transport system substrate-binding protein 3.40.190.10 166 21 84 3.23 3.83
1sbpA01 83.29 ABC transportersSalmonella enterica subsp. enterica serovar TyphimuriumSulfate-binding proteinSulfate transport system substrate-binding protein 3.40.190.10 151 15 84 3.60 4.25
2onsA01 83.24 Putative sulfate transport system substrate-binding proteinMolybdate/tungstate-binding protein wtpAArchaeoglobus fulgidusABC transporters 3.40.190.10 143 16 82 3.09 3.73
3cvgA01 82.38 3.40.190.10 144 12 82 3.09 3.73
1eu8A01 81.92 Pyrococcus furiosusMultiple sugar transport system substrate-binding proteinTrehalose/maltose binding protein 3.40.190.10 190 15 75 2.51 3.33
1anfA01 81.40 Bacterial chemotaxisABC transportersMaltose/maltodextrin transport system substrate-binding proteinMaltose-binding periplasmic proteinDisaccharide binding 3.40.190.10 179 17 80 3.10 3.85
1eljA01 81.33 Pyrococcus furiosusMaltooligosaccharide transport system substrate-binding proteinABC transportersMaltotriose-binding protein 3.40.190.10 182 13 79 2.85 3.60
1ursB01 80.17 Maltose binding proteinAlicyclobacillus acidocaldarius subsp. acidocaldarius 3.40.190.10 186 14 75 2.91 3.84
1xs5A01 79.40 ABC transportersTreponema pallidumMembrane lipoprotein TpN32D-methionine transport system substrate-binding protein 3.40.190.10 134 8 82 3.89 4.69
3thiA01 79.01 Paenibacillus thiaminolyticusThiaminase-1 3.40.190.10 175 9 79 3.33 4.19
2ql3A01 76.91 Rhodococcus jostii RHA1Probable transcriptional regulator, LysR family protein 3.40.190.10 97 16 61 2.68 4.35
3fzvD02 76.18 Probable transcriptional regulatorPseudomonas aeruginosa 3.40.190.10 109 10 65 2.95 4.53
Displaying entries 1 to 18 (page 1 of 1)


Domain ATOM Sequence

>pdb|1q35A01
ANEVNVYSYRQPYLIEPMLKNFEKDTGIKVNIIFADGLVDRVKQEGELSPADVLLTVDISRVMEIVNADLAQKIDSKVLE
KNIPAQFRDSNDQWFGLTHKNISGVVIAKHSPNKANAVKLIEYLSGEKAQGLYAELNHEYPVKEGI    

Domain COMBS Sequence

>pdb|1q35A01
ANEVNVYSYRQPYLIEPMLKNFEKDTGIKVNIIFADKGLVDRVKQEGELSPADVLLTVDISRVMEIVNADLAQKIDSKVL
EKNIPAQFRDSNDQWFGLTHKNISGVVIAKHSPNKANAVKLIEYLSGEKAQGLYAELNHEYPVKEGI    

Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 05 Mar 2006 23:35

Cut based on decision in database "DomChop" on "cathdb"