CATH Domain: 1pwbC00 XML data for domain: 1pwbC00

Molscript image for 1pwbC00
1pwbC00
PDB coordinates for domain 1pwbC00

PDB 1pwb, Chain C, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.10 Roll
3.10.100 Mannose-Binding Protein A; Chain A
3.10.100.10 Mannose-Binding Protein A, subunit A Gene3D
3.10.100.10.10
3.10.100.10.10.1
3.10.100.10.10.1.1
3.10.100.10.10.1.1.1
3.10.100.10.10.1.1.1.1

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Segment boundaries for domain 1pwbC00

Chopping figure for domain 1pwbC00
DomainStart PDB ResidueStop PDB Residue
1pwbC00 206 355

Structural Neighbourhood (14 entries)

There are 14 matching structural neighberhood comparisons for CATH ID 3.10.100.10.10.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 14 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1rtm100 89.99 Calcium ion bindingMannose bindingRattus norvegicusProtein homodimerization activityExtracellular space 3.10.100.10 149 38 96 4.54 4.73
1kza100 89.59 Rattus norvegicusMannose bindingProtein self-associationMannose-binding lectinMannose-binding protein C 3.10.100.10 115 45 76 0.90 1.18
1tn3A00 88.87 Skeletal system developmentHomo sapiensTetranectinProtein binding 3.10.100.10 135 26 80 1.46 1.81
1wmzA00 87.54 Cucumaria echinataLectin CEL-I, N-acetyl-D-galactosamine-specific C-type 3.10.100.10 140 19 83 2.66 3.19
1jznA00 86.33 Galactose-specific lectinCrotalus atrox 3.10.100.10 135 18 83 2.42 2.90
1g1tA01 85.30 Response to tumor necrosis factorCoated pitHeterophilic cell-cell adhesionPerinuclear region of cytoplasmPhospholipase binding 3.10.100.10 119 26 74 2.00 2.70
1h8uB00 84.34 Bone marrow proteoglycanHomo sapiensBone marrow proteoglycanExtracellular regionSugar binding 3.10.100.10 116 19 74 2.04 2.76
1eslA00 84.32 Response to tumor necrosis factorCoated pitHeterophilic cell-cell adhesionPerinuclear region of cytoplasmPhospholipase binding 3.10.100.10 157 21 70 1.99 2.81
1byfA00 84.10 LectinPolyandrocarpa misakiensis 3.10.100.10 123 21 76 2.10 2.76
3g8kA00 83.31 Mus musculusPlasma membraneLectin-related NK cell receptor LY49L1 3.10.100.10 127 10 80 3.91 4.89
1hq8A00 82.56 Positive regulation of interferon-gamma productionPositive regulation of natural killer cell mediated cytotoxicityPositive regulation of nitric oxide biosynthetic processMHC class I protein bindingNatural killer cell activation 3.10.100.10 123 13 78 3.41 4.33
3bdwA00 81.63 Killer cell lectin-like receptor subfamily D, member 1Natural killer cell mediated cytotoxicityNatural killer cells antigen CD94Antigen processing and presentationGraft-versus-host disease 3.10.100.10 123 13 79 3.77 4.75
1rjhA00 80.86 Skeletal system developmentHomo sapiensTetranectinProtein binding 3.10.100.10 118 27 70 2.58 3.65
1cwvA05 75.03 InvasinYersinia pseudotuberculosis 3.10.100.10 100 8 54 2.73 4.99
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Displaying entries 1 to 14 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1pwbC00
SLRQQVEALQGQVQHLQAAFSQYKKVELFPNGQSVGEKIFKTAGFVKPFTEAQLLCTQAGGQLASPRSAAENAALQQLVV
AKNEAAFLSMTDSKTEGKFTYPTGESLVYSNWAPGEPNDDGGSEDCVEIFTNGKWNDRACGEKRLVVCEF
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1pwbC00
SLRQQVEALQGQVQHLQAAFSQYKKVELFPNGQSVGEKIFKTAGFVKPFTEAQLLCTQAGGQLASPRSAAENAALQQLVV
AKNEAAFLSMTDSKTEGKFTYPTGESLVYSNWAPGEPNDDGGSEDCVEIFTNGKWNDRACGEKRLVVCEF
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:51

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:51

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:13

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"