CATH Domain: 1pviB00 XML data for domain: 1pviB00

Molscript image for 1pviB00
1pviB00
PDB coordinates for domain 1pviB00

PDB 1pvi, Chain B, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.210 PvuII Endonuclease; Chain A
3.40.210.10 PVUII Endonuclease, subunit A Gene3D
3.40.210.10.1
3.40.210.10.1.1
3.40.210.10.1.1.1
3.40.210.10.1.1.1.3
3.40.210.10.1.1.1.3.10

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Segment boundaries for domain 1pviB00

Chopping figure for domain 1pviB00
DomainStart PDB ResidueStop PDB Residue
1pviB00 2 157

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 3.40.210.10.1.1.1.3.10 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2wcwD00 72.77 Holliday junction resolvase, archaea typeArchaeoglobus fulgidusPutative uncharacterized protein 3.40.1350.10 125 10 62 3.02 4.81
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1pviB00
SHPDLNKLLELWPHIQEYQDLALKHGINDIFQDNGGKLLQVLLITGLTVLPGREGNDAVDNAGQEYELKSINIDLTKGFS
THHHMNPVIIAKYRQVPWIFAIYRGIAIEAIYRLEPKDLEFYYDKWERKWYSDGHKDINNPKIPVKYVMEHGTKIY
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1pviB00
MSHPDLNKLLELWPHIQEYQDLALKHGINDIFQDNGGKLLQVLLITGLTVLPGREGNDAVDNAGQEYELKSINIDLTKGF
STHHHMNPVIIAKYRQVPWIFAIYRGIAIEAIYRLEPKDLEFYYDKWERKWYSDGHKDINNPKIPVKYVMEHGTKIY
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:25

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:25

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:47

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"