CATH Domain: 1pvgA01 XML data for domain: 1pvgA01

Molscript image for 1pvgA01
1pvgA01
PDB coordinates for domain 1pvgA01

PDB 1pvg, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.565 Heat Shock Protein 90
3.30.565.10 Gene3D
3.30.565.10.10
3.30.565.10.10.1
3.30.565.10.10.1.1
3.30.565.10.10.1.1.1
3.30.565.10.10.1.1.1.1

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Segment boundaries for domain 1pvgA01

Chopping figure for domain 1pvgA01
DomainStart PDB ResidueStop PDB Residue
1pvgA01 15 258
1pvgA02 279 406

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 3.30.565.10.10.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1s14B00 81.80 CytoplasmPlasmid partitioningTopoisomerase IV subunit B [EC:5.99.1.-]DNA topoisomerase 4 subunit BSister chromatid cohesion 3.30.565.10 178 20 71 2.17 3.04
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1pvgA01
ISQLEHILKRPDTYIGSVETQEQLQWIYDEETDCIEKNVTIVPGLFKIFDEILVNAADNKVRDPSKRIDVNIHAEEHTIE
VKNDGKGIPIEIHNKENIYIPEIFGHLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTEFILETADLNVGQKYVQKWENNS
ICHPPKITSYKKGPSYTKVTFKPDLTRFGKELDNDILGVRRRVYDINGSVRDINVYLNGKSLKIRNFKNYVELYLKSL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1pvgA01
ISQLEHILKRPDTYIGSVETQEQLQWIYDEETDCXIEKNVTIVPGLFKIFDEILVNAADNKVRDPSXKRIDVNIHAEEHT
IEVKNDGKGIPIEIHNKENIYIPEXIFGHLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTEFILETADLNVGQKYVQKWE
NNXSICHPPKITSYKKGPSYTKVTFKPDLTRFGXKELDNDILGVXRRRVYDINGSVRDINVYLNGKSLKIRNFKNYVELY
LKSL
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:07

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:07

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:33

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"