CATH Domain: 1pszA02 XML data for domain: 1pszA02

Molscript image for 1pszA02
1pszA02
PDB coordinates for domain 1pszA02

PDB 1psz, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.1980 Nitrogenase molybdenum iron protein domain Gene3D
3.40.50.1980.9
3.40.50.1980.9.1
3.40.50.1980.9.1.2
3.40.50.1980.9.1.2.1
3.40.50.1980.9.1.2.1.1

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Segment boundaries for domain 1pszA02

Chopping figure for domain 1pszA02
DomainStart PDB ResidueStop PDB Residue
1pszA01 24 178
1pszA02 179 309

Structural Neighbourhood (6 entries)

There are 6 matching structural neighberhood comparisons for CATH ID 3.40.50.1980.9.1.2.1.1 (SIMAX score < 5)

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Displaying entries 1 to 6 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1pq4A02 85.15 Periplasmic binding protein component of an ABC type zinc uptake transporterZinc transport system substrate-binding proteinABC transportersSynechocystis sp. PCC 6803 3.40.50.1980 103 14 78 1.87 2.38
3cx3A02 82.27 ABC transportersLipoproteinZinc transport system substrate-binding proteinStreptococcus pneumoniae R6 3.40.50.1980 107 26 80 2.18 2.69
1mb3A00 74.32 Caulobacter vibrioidesTwo-component systemTwo-component system, cell cycle response regulator DivKPolar differentiation response regulatorCell cycle - Caulobacter 3.40.50.2300 115 13 65 3.28 5.00
2fcjC00 73.64 Geobacillus kaustophilusHypothetical conserved protein 3.40.1360.20 115 4 70 3.51 5.00
3gt7A00 73.25 Sensor proteinSyntrophus aciditrophicus SB 3.40.50.2300 131 8 66 3.11 4.68
2qr3A00 73.03 Bacteroides fragilisTwo-component system response regulator 3.40.50.2300 119 6 66 3.15 4.74
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Displaying entries 1 to 6 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1pszA02
KLDKLDKESKDKFNKIPAEKKLIVTSEGAFKYFSKAYGVPSAYIWEINTEEEGTPEQIKTLVEKLRQTKVPSLFVESSVD
DRPMKTVSQDTNIPIYAQIFTDSIAEQGKEGDSYYSMMKYNLDKIAEGLAK
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1pszA02
KLDKLDKESKDKFNKIPAEKKLIVTSEGAFKYFSKAYGVPSAYIWEINTEEEGTPEQIKTLVEKLRQTKVPSLFVESSVD
DRPMKTVSQDTNIPIYAQIFTDSIAEQGKEGDSYYSMMKYNLDKIAEGLAK
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:22

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:22

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:33

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"