CATH Domain: 1pszA01 XML data for domain: 1pszA01

Molscript image for 1pszA01
1pszA01
PDB coordinates for domain 1pszA01

PDB 1psz, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.1980 Nitrogenase molybdenum iron protein domain Gene3D
3.40.50.1980.13
3.40.50.1980.13.1
3.40.50.1980.13.1.2
3.40.50.1980.13.1.2.1
3.40.50.1980.13.1.2.1.1

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Segment boundaries for domain 1pszA01

Chopping figure for domain 1pszA01
DomainStart PDB ResidueStop PDB Residue
1pszA01 24 178
1pszA02 179 309

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 3.40.50.1980.13.1.2.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2o1eB01 88.48 Bacillus subtilisZinc transport system substrate-binding proteinABC transportersProbable zinc transport system zinc-binding lipoprotein AdcA 3.40.50.1980 146 33 87 2.31 2.65
1pq4A01 88.25 Periplasmic binding protein component of an ABC type zinc uptake transporterZinc transport system substrate-binding proteinABC transportersSynechocystis sp. PCC 6803 3.40.50.1980 152 26 90 1.85 2.04
3gi1B01 87.05 ABC transportersLaminin binding proteinStreptococcus pyogenes serotype M1Zinc transport system substrate-binding protein 3.40.50.1980 144 28 85 2.66 3.10
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1pszA01
KKDTTSGQKLKVVATNSIIADITKNIAGDKIDLHSIVPIGQDPHEYEPLPEDVKKTSEADLIFYNGINLETGGNAWFTKL
VENAKKTENKDYFAVSDGVDVIYLEGQNEKGKEDPHAWLNLENGIIFAKNIAKQLSAKDPNNKEFYEKNLKEYTD
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1pszA01
KKDTTSGQKLKVVATNSIIADITKNIAGDKIDLHSIVPIGQDPHEYEPLPEDVKKTSEADLIFYNGINLETGGNAWFTKL
VENAKKTENKDYFAVSDGVDVIYLEGQNEKGKEDPHAWLNLENGIIFAKNIAKQLSAKDPNNKEFYEKNLKEYTD
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:22

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:22

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:33

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"