CATH Domain: 1psrA00 XML data for domain: 1psrA00

Molscript image for 1psrA00
1psrA00
PDB coordinates for domain 1psrA00

PDB 1psr, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.238 Recoverin; domain 1
1.10.238.10 EF-hand Gene3D
1.10.238.10.1
1.10.238.10.1.1
1.10.238.10.1.1.1
1.10.238.10.1.1.1.1
1.10.238.10.1.1.1.1.1

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Segment boundaries for domain 1psrA00

Chopping figure for domain 1psrA00
DomainStart PDB ResidueStop PDB Residue
1psrA00 1 100

Structural Neighbourhood (14 entries)

There are 14 matching structural neighberhood comparisons for CATH ID 1.10.238.10.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 14 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1a4pA00 89.69 Protein S100-A10Homo sapiens 1.10.238.10 92 21 92 3.70 4.02
1xk4E00 88.66 Protein S100-A8Calcium ion bindingHomo sapiensInflammatory responseProtein binding 1.10.238.10 89 24 86 2.07 2.41
3cztX00 88.58 S100 beta bindingRuffleProtein homodimerization activityNucleusRAGE receptor binding 1.10.238.10 87 24 84 3.08 3.67
3c1vA00 87.31 Calcium ion bindingNucleusRAGE receptor bindingEpithelial to mesenchymal transitionPositive regulation of I-kappaB kinase/NF-kappaB cascade 1.10.238.10 87 25 84 3.23 3.85
2wcbA00 85.59 Calcium ion bindingZinc ion bindingPlasma membraneNucleusRAGE receptor binding 1.10.238.10 92 25 89 3.85 4.33
1k8uA00 82.97 RuffleS100 beta bindingCalcium ion bindingProtein homodimerization activityExtrinsic to internal side of plasma membrane 1.10.238.10 87 21 84 3.21 3.82
1qx2A00 82.65 Protein S100-GBos taurus 1.10.238.10 75 26 72 2.86 3.97
1eg3A04 80.32 Cell surfaceCostamereCytoskeletonDystrophin-associated glycoprotein complexActin binding 1.10.238.10 82 8 78 3.53 4.53
1tizA00 79.56 Calcium-binding protein CMLArabidopsis thalianaPlant-pathogen interactionProbable calcium-binding protein CML34 1.10.238.10 66 15 65 2.80 4.31
1jfjA01 78.26 Entamoeba histolyticaCalcium-binding protein 1.10.238.10 63 15 62 2.74 4.42
2bl0B01 78.13 Physarum polycephalumMyosin regulatory light chain 1.10.238.10 68 14 67 3.04 4.54
1k90E01 76.00 Phosphatidylinositol signaling systemCalcium signaling pathwayOocyte meiosisMelanogenesisInsulin signaling pathway 1.10.238.10 74 24 73 3.08 4.22
1s26D01 74.58 Calcium signaling pathwayPhosphatidylinositol signaling systemOocyte meiosisMelanogenesisInsulin signaling pathway 1.10.238.10 59 27 59 2.86 4.85
1djxB01 74.48 Calcium ion bindingCalcium signaling pathwayPhosphatidylinositol signaling systemRattus norvegicusElevation of cytosolic calcium ion concentration involved in G-protein signaling coupled to IP3 second messenger 1.10.238.10 52 15 52 2.52 4.85
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Displaying entries 1 to 14 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1psrA00
SNTQAERSIIGMIDMFHKYTRRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGD
IATDYHKQSHGAAPCSGGSQ
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1psrA00
SNTQAERSIIGMIDMFHKYTRRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGD
IATDYHKQSHGAAPCSGGSQ
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:06

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:06

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:25

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"