CATH Domain: 1pqhB00 XML data for domain: 1pqhB00

Molscript image for 1pqhB00
1pqhB00
PDB coordinates for domain 1pqhB00

PDB 1pqh, Chain B, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.40 Beta Barrel
2.40.40 Barwin-like endoglucanases
2.40.40.20 Gene3D
2.40.40.20.1
2.40.40.20.1.1
2.40.40.20.1.1.1
2.40.40.20.1.1.1.2
2.40.40.20.1.1.1.2.1

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Segment boundaries for domain 1pqhB00

Chopping figure for domain 1pqhB00
DomainStart PDB ResidueStop PDB Residue
1pqhB00 1 115

Structural Neighbourhood (7 entries)

There are 7 matching structural neighberhood comparisons for CATH ID 2.40.40.20.1.1.1.2.1 (SIMAX score < 5)

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Displaying entries 1 to 7 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2c45A00 91.78 Beta-Alanine metabolismPantothenate and CoA biosynthesisMetabolic pathwaysAspartate 1-decarboxylase [EC:4.1.1.11]Aspartate 1-decarboxylase 2.40.40.20 113 49 94 1.12 1.18
1vc3B00 89.19 Thermus thermophilus HB8Aspartate 1-decarboxylase [EC:4.1.1.11]Beta-Alanine metabolismAspartate 1-decarboxylasePantothenate and CoA biosynthesis 2.40.40.20 95 44 76 0.84 1.10
1uheA00 87.41 Helicobacter pyloriAspartate 1-decarboxylase [EC:4.1.1.11]Beta-Alanine metabolismAspartate 1-decarboxylasePantothenate and CoA biosynthesis 2.40.40.20 97 32 75 1.17 1.55
1e32A01 79.92 Mus musculusPolyubiquitin bindingProtein complexAggresome assemblyTransitional endoplasmic reticulum ATPase 2.40.40.20 87 12 70 3.46 4.92
1cz4A01 77.96 VCP-like ATPaseTransitional endoplasmic reticulum ATPaseThermoplasma acidophilum 2.40.40.20 92 13 70 2.82 4.01
2napA04 77.71 Nitrogen metabolismDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774Periplasmic nitrate reductasePeriplasmic nitrate reductase NapA [EC:1.7.99.4] 2.40.40.20 114 5 63 2.64 4.15
1wlfA01 77.71 Mus musculusPeroxisome biogenesis factor 1 2.40.40.20 84 13 67 2.79 4.12
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Displaying entries 1 to 7 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1pqhB00
MIRTMLQGKLHRVKVTHADLHYEGTCAIDQDFLDAAGILENEAIDIWNVTNGKRFSTYAIAAERGSRIISVNGAAAHASV
GDIVIIASFVTMPDEEARTWRPNVAYFEGDNEMK
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1pqhB00
MIRTMLQGKLHRVKVTHADLHYEGTCAIDQDFLDAAGILENEAIDIWNVTNGKRFSTYAIAAERGSRIISVNGAAAHXAS
VGDIVIIASFVTMPDEEARTWRPNVAYFEGDNEMKRTAKAIPVQVA
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:29

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:29

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:49

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"