CATH Domain: 1pn2C01 XML data for domain: 1pn2C01

Molscript image for 1pn2C01
1pn2C01
PDB coordinates for domain 1pn2C01

PDB 1pn2, Chain C, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.10 Roll
3.10.129 Thiol Ester Dehydrase; Chain A
3.10.129.10 Gene3D
3.10.129.10.19
3.10.129.10.19.1
3.10.129.10.19.1.1
3.10.129.10.19.1.1.1
3.10.129.10.19.1.1.1.1

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Segment boundaries for domain 1pn2C01

Chopping figure for domain 1pn2C01
DomainStart PDB ResidueStop PDB Residue
1pn2C01 5 152
1pn2C02 153 275

Structural Neighbourhood (9 entries)

There are 9 matching structural neighberhood comparisons for CATH ID 3.10.129.10.19.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 9 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1s9cL01 87.34 Sterol bindingPeroxisomeEstradiol 17-beta-dehydrogenase activityPrimary bile acid biosynthesisSterol transporter activity 3.10.129.10 140 29 90 3.07 3.38
1q6wG00 78.13 Monoamine oxidase regulatory protein, putativeArchaeoglobus fulgidus 3.10.129.10 147 6 83 3.76 4.49
2q2bA00 76.60 Mus musculusCytosolic acyl coenzyme A thioester hydrolaseFatty acid catabolic processPalmitoyl-CoA hydrolase activity 3.10.129.10 141 4 74 3.68 4.96
2pimA00 76.54 Ralstonia eutropha JMP134Phenylacetic acid degradation-related protein 3.10.129.10 127 9 64 3.05 4.74
1z6bC00 76.38 Fatty acid biosynthesisMetabolic pathways3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-]Plasmodium falciparumBeta-hydroxyacyl-ACP dehydratase 3.10.129.10 138 5 70 3.37 4.77
3b7kA02 76.35 Acetyl-CoA hydrolase [EC:3.1.2.1]Pyruvate metabolismHomo sapiensAcyl-coenzyme A thioesterase 12 3.10.129.10 121 8 72 3.19 4.43
1tbuB00 76.03 Palmitoyl-CoA hydrolase [EC:3.1.2.2]Protein bindingBiosynthesis of unsaturated fatty acidsPeroxisomal acyl-coenzyme A thioester hydrolase 1Peroxisome 3.10.129.10 98 5 58 2.59 4.41
3b7kC02 75.97 Acetyl-CoA hydrolase [EC:3.1.2.1]Pyruvate metabolismHomo sapiensAcyl-coenzyme A thioesterase 12 3.10.129.10 110 10 67 2.95 4.39
1zkiA00 75.08 Pseudomonas aeruginosaPhenylacetic acid degradation proteinPutative uncharacterized protein 3.10.129.10 118 5 64 3.20 4.97
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Displaying entries 1 to 9 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1pn2C01
PVWRFDDRDVILYNIALGATTKQLKYVYENDSDFQVIPTFGHLITFNSNSFAKLLRNFNPLLLHGEHYLKVHSWPPPTEG
EIKTTFEPIATTPKGTNVVIVHGSKSVDNKSGELIYSNEATYFIRNCQADNKVYADRPAFATN
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1pn2C01
XEDDPVWRFDDRDVILYNIALGATTKQLKYVYENDSDFQVIPTFGHLITFNSGKSQNSFAKLLRNFNPXLLLHGEHYLKV
HSWPPPTEGEIKTTFEPIATTPKGTNVVIVHGSKSVDNKSGELIYSNEATYFIRNCQADNKVYADRPAFATN
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 18:24

Assigning to "3.10.129.10" based on similarity with "1pn2A01" (NWSI: 98.6842105263158, NWO: 100, SPS: 93.63, SPO: 96, RMSD: 1.41)

Flow stage update by auto on 28 Apr 2006 17:50

NW result present for Domain "1pn2C01"

Flow stage update by auto on 28 Apr 2006 17:43

All required files are present for Domain "1pn2C01"

Flow stage update by auto on 27 Apr 2006 17:31

Beginning processing for Domain "1pn2C01"

Insertion by auto on 08 Mar 2006 22:15

Final ChopClose added based on similarity with "1pn2A" [LEE: 0, LME: 0, MR: 1, LG: 4, SS: 94.94, SI: 98.5714285714286, SO: 100]