CATH Domain: 1pinA01 XML data for domain: 1pinA01

Molscript image for 1pinA01
1pinA01
PDB coordinates for domain 1pinA01

PDB 1pin, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.20 Single Sheet
2.20.70 Ubiquitin Ligase Nedd4; Chain: W;
2.20.70.10 Gene3D
2.20.70.10.1
2.20.70.10.1.1
2.20.70.10.1.1.1
2.20.70.10.1.1.1.1
2.20.70.10.1.1.1.1.1

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Segment boundaries for domain 1pinA01

Chopping figure for domain 1pinA01
DomainStart PDB ResidueStop PDB Residue
1pinA01 6 37
1pinA02 54 163

Structural Neighbourhood (9 entries)

There are 9 matching structural neighberhood comparisons for CATH ID 2.20.70.10.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 9 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2f21A01 91.05 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1Regulation of pathway-restricted SMAD protein phosphorylationRegulation of mitosisNucleusPeptidyl-prolyl cis-trans isomerase activity 2.20.70.10 39 90 79 1.02 1.28
1o6wA01 88.74 U2-type prespliceosomeRNA bindingPre-mRNA-processing factor 40Nuclear mRNA splicing, via spliceosomeProtein binding 2.20.70.10 26 46 81 1.10 1.35
1wr7A01 88.27 Mus musculusE3 ubiquitin-protein ligase NEDD4-likeSodium channel inhibitor activityProtein bindingNegative regulation of sodium ion transport 2.20.70.10 33 43 90 1.77 1.95
1o6wA02 87.73 U2-type prespliceosomeRNA bindingPre-mRNA-processing factor 40Protein bindingNuclear mRNA splicing, via spliceosome 2.20.70.10 33 31 84 1.24 1.46
2dmvA01 86.82 E3 ubiquitin-protein ligase Itchy homologHomo sapiensProtein bindingEntry of virus into host cell 2.20.70.10 36 50 83 1.70 2.04
1tk7A02 85.89 Atrophin-1 interacting protein 5 (WW domain containing E3 ubiquitin protein ligase 1) [EC:6.3.2.19]Wing disc dorsal/ventral pattern formationImaginal disc-derived wing vein morphogenesisImaginal disc-derived wing margin morphogenesisDrosophila melanogaster 2.20.70.10 29 34 87 2.41 2.75
1eg3A01 84.78 Cell surfaceCostamereCytoskeletonDystrophin-associated glycoprotein complexActin binding 2.20.70.10 38 28 76 2.12 2.78
3cngA01 84.58 NUDIX hydrolaseNitrosomonas europaea 2.20.70.10 34 6 85 1.67 1.96
1k5rA00 79.21 CytoplasmTranscription corepressor activityNucleusHomo sapiensYorkie homolog 2.20.70.10 39 37 76 2.14 2.78
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Displaying entries 1 to 9 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1pinA01
KLPPGWEKRMSRSSGRVYYFNHITNASQWERP
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1pinA01
MADEEKLPPGWEKRMSRSSGRVYYFNHITNASQWERP
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 17:53

Assigning to "2.20.70.10" based on similarity with "1f8aB01" (NWSI: 100, NWO: 90.2439024390244, SPS: 92.33, SPO: 91, RMSD: 1.34)

Flow stage update by auto on 28 Apr 2006 17:49

NW result present for Domain "1pinA01"

Flow stage update by auto on 28 Apr 2006 17:42

All required files are present for Domain "1pinA01"

Flow stage update by auto on 27 Apr 2006 17:30

Beginning processing for Domain "1pinA01"

Insertion by auto on 08 Mar 2006 14:52

Final ChopClose added based on similarity with "1f8aB" [LEE: 0, LME: 0, MR: 3, LG: 9, SS: 93.63, SI: 100, SO: 97.6047904191617]