CATH Domain: 1pguB01 XML data for domain: 1pguB01

Molscript image for 1pguB01
1pguB01
PDB coordinates for domain 1pguB01

PDB 1pgu, Chain B, Domain 1

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.130 7 Propellor
2.130.10 Methylamine Dehydrogenase; Chain H
2.130.10.10 YVTN repeat-like/Quinoprotein amine dehydrogenase Gene3D
2.130.10.10.26
2.130.10.10.26.1
2.130.10.10.26.1.1
2.130.10.10.26.1.1.1
2.130.10.10.26.1.1.1.1

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Segment boundaries for domain 1pguB01

Chopping figure for domain 1pguB01
DomainStart PDB ResidueStop PDB Residue
1pguB01 2 12
1pguB01 338 615
1pguB02 13 337

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 2.130.10.10.26.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1p22A02 81.18 Ubiquitin-dependent protein catabolic processF-box/WD repeat-containing protein 1AHomo sapiensProtein bindingSignal transduction 2.130.10.10 295 15 87 2.73 3.13
1rwiA00 77.42 Serine/threonine protein kinase, bacterial [EC:2.7.11.1]Serine/threonine-protein kinase pknDMycobacterium tuberculosis 2.120.10.30 256 8 84 3.85 4.55
1q7fB00 76.99 Regulation of translationOogenesisNeuroblast proliferationRRNA transcriptionSegmentation 2.120.10.30 282 8 83 4.07 4.86
1npeA00 76.20 Mus musculusCell-matrix adhesionNidogen-1Collagen bindingBasement membrane 2.120.10.30 263 4 79 3.60 4.50
2vdrA00 70.72 Integrin alpha 2BIdentical protein bindingPathways in cancerHematopoietic cell lineageDilated cardiomyopathy 2.130.10.130 452 8 60 2.86 4.74
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Displaying entries 1 to 5 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1pguB01
SSISLKEIIPPHNKGITALTVNPLISGSYDGRIEWSSSSHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQ
PKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLR
AKPSYISISPSETYIAAGDVGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEEIEEDLVATGSLDTNIFIYSVKRPKI
IKALNAHKDGVNNLLWETPSTLVSSGADACIKRWNVVLE
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1pguB01
MSSISLKEIIPPHNKGITALTVNPLISGSYDGRIXEWSSSSXHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEF
GSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKT
PLRAKPSYISISPSETYIAAGDVXGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNI
FIYSVKRPXKIIKALNAHKDGVNNLLWETPSTLVSSGADACIKRWNVVLE
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 01 Nov 2006 18:07

Assigning to "2.130.10.10" based on similarity with "1pi6A01"

Flow stage update by auto on 01 Nov 2006 18:02

NW result present for Domain "1pguB01"

Flow stage update by auto on 01 Nov 2006 18:02

No in_process hits for Domain "1pguB01" ready to be processed

Flow stage update by auto on 01 Nov 2006 14:25

All required files are present for Domain "1pguB01"

Flow stage update by auto on 01 Nov 2006 14:25

Beginning processing for Domain "1pguB01"

Insertion by cuff on 01 Nov 2006 11:16

Nice BATCH of choppings.