CATH Domain: 1pe9A00 XML data for domain: 1pe9A00

Molscript image for 1pe9A00
1pe9A00
PDB coordinates for domain 1pe9A00

PDB 1pe9, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.160 3 Solenoid
2.160.20 Pectate Lyase C-like
2.160.20.10 Single-stranded right-handed beta-helix, Pectin lyase-like Gene3D
2.160.20.10.2
2.160.20.10.2.1
2.160.20.10.2.1.1
2.160.20.10.2.1.1.1
2.160.20.10.2.1.1.1.1

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Segment boundaries for domain 1pe9A00

Chopping figure for domain 1pe9A00
DomainStart PDB ResidueStop PDB Residue
1pe9A00 1 361

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 2.160.20.10.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2o04A00 88.41 Bacillus subtilisPentose and glucuronate interconversionsPectate lyase [EC:4.2.2.2]Pectate lyase 2.160.20.10 399 34 86 1.47 1.69
2qy1A00 82.99 Pentose and glucuronate interconversionsXanthomonas campestris pv. campestrisPectate lyase [EC:4.2.2.2]Pectate lyase II 2.160.20.10 330 19 83 3.56 4.27
1qcxA00 82.67 Pectin lyase BAspergillus niger 2.160.20.10 359 23 79 2.89 3.64
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1pe9A00
AELVSDKALESAPTVGWASQNGFTTGGAAATSDNIYIVTNISEFTSALSAGAEAKIIQIKGTIDISGGTPYTDFADQKAR
SQINIPANTTVIGLGTDAKFINGSLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHV
TISDGNFTDDMYTTKDGETYVQHDGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNNVFNRVTE
RAPRVRYGSIHSFNNVFKGDAKDPVYRYQYSFGIGTSGSVLSEGNSFTIANLSASKACKVVKKFNGSIFSDNGSVLNGSA
VDLSGCGFSAYTSKIPYIYDVQPMTTELAQSITDNAGSGKL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1pe9A00
AELVSDKALESAPTVGWASQNGFTTGGAAATSDNIYIVTNISEFTSALSAGAEAKIIQIKGTIDISGGTPYTDFADQKAR
SQINIPANTTVIGLGTDAKFINGSLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHV
TISDGNFTDDMYTTKDGETYVQHDGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNNVFNRVTE
RAPRVRYGSIHSFNNVFKGDAKDPVYRYQYSFGIGTSGSVLSEGNSFTIANLSASKACKVVKKFNGSIFSDNGSVLNGSA
VDLSGCGFSAYTSKIPYIYDVQPMTTELAQSITDNAGSGKL
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:49

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:49

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:11

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"