CATH Domain: 1p7nA00 XML data for domain: 1p7nA00

Molscript image for 1p7nA00
1p7nA00
PDB coordinates for domain 1p7nA00

PDB 1p7n, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.375 Human Immunodeficiency Virus Type 1 Capsid Protein
1.10.375.10 Human Immunodeficiency Virus Type 1 Capsid Protein Gene3D
1.10.375.10.5
1.10.375.10.5.1
1.10.375.10.5.1.1
1.10.375.10.5.1.1.1
1.10.375.10.5.1.1.1.1

[top]
Segment boundaries for domain 1p7nA00

Chopping figure for domain 1p7nA00
DomainStart PDB ResidueStop PDB Residue
1p7nA00 -28 147

Structural Neighbourhood (0 entries)

Sorry, we could not find any non-redundant representatives with similar structural scores to this domain in CATH.


[top]
Domain ATOM Sequence 

>pdb|1p7nA00
GPTSPGPALTDWARVREELASTGPPVVAMPVVIKTEGPAWTPLEPKLITRLADTVRTKGLRSPITMAEVEALMSSPLLPH
DVTNLMRVILGPAPYALWMDAWGVQLQTVIAAATRDPRHPANGQGRGERTNLNRLKGLADGMVGNPQGQAALLRPGELVA
ITASALQAFREVARLA
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|1p7nA00
GPTSPGPALTDWARVREELASTGPPVVAMPVVIKTEGPAWTPLEPKLITRLADTVRTKGLRSPITMAEVEALMSSPLLPH
DVTNLMRVILGPAPYALWMDAWGVQLQTVIAAATRDPRHPANGQGRGERTNLNRLKGLADGMVGNPQGQAALLRPGELVA
ITASALQAFREVARLA
BLAST against CATH

[top]
Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:08

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:08

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:27

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"