CATH Domain: 1p6oA00 XML data for domain: 1p6oA00

Molscript image for 1p6oA00
1p6oA00
PDB coordinates for domain 1p6oA00

PDB 1p6o, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.140 Cytidine Deaminase; domain 2
3.40.140.10 Cytidine Deaminase, domain 2 Gene3D
3.40.140.10.2
3.40.140.10.2.1
3.40.140.10.2.1.1
3.40.140.10.2.1.1.1
3.40.140.10.2.1.1.1.1

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Segment boundaries for domain 1p6oA00

Chopping figure for domain 1p6oA00
DomainStart PDB ResidueStop PDB Residue
1p6oA00 3 158

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 3.40.140.10.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1vq2A00 81.79 Deoxycytidylate deaminaseEnterobacteria phage T4 3.40.140.10 173 18 75 3.10 4.09
1thzA03 81.54 One carbon pool by folatePurine metabolismProtein homodimerization activityBifunctional purine biosynthesis protein PURHGallus gallus 3.40.140.20 147 8 78 3.81 4.87
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1p6oA00
TGGMASKWDQKGMDIAYEEAALGYKEGGVPIGGCLINNKDGSVLGRGHNMRFQKGSATLHGEISTLENCGRLEGKVYKDT
TLYTTLSPCDMCTGAIIMYGIPRCVVGENVNFKSKGEKYLQTRGHEVVVVDDERCKKIMKQFIDERPQDWFEDIGE
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1p6oA00
GSSMVTGGMASKWDQKGMDIAYEEAALGYKEGGVPIGGCLINNKDGSVLGRGHNMRFQKGSATLHGEISTLENCGRLEGK
VYKDTTLYTTLSPCDMCTGAIIMYGIPRCVVGENVNFKSKGEKYLQTRGHEVVVVDDERCKKIMKQFIDERPQDWFEDIG
E
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:24

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:24

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:47

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"