CATH Domain: 1p5jA02 XML data for domain: 1p5jA02

Molscript image for 1p5jA02
1p5jA02
PDB coordinates for domain 1p5jA02

PDB 1p5j, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.1100 Gene3D
3.40.50.1100.15
3.40.50.1100.15.1
3.40.50.1100.15.1.1
3.40.50.1100.15.1.1.1
3.40.50.1100.15.1.1.1.1

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Segment boundaries for domain 1p5jA02

Chopping figure for domain 1p5jA02
DomainStart PDB ResidueStop PDB Residue
1p5jA01 4 40
1p5jA01 137 322
1p5jA02 41 136

Structural Neighbourhood (7 entries)

There are 7 matching structural neighberhood comparisons for CATH ID 3.40.50.1100.15.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 7 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1mioB04 78.57 Nitrogenase molybdenum-iron protein beta chainClostridium pasteurianum 3.40.50.1980 98 10 74 2.98 4.00
2q5cA02 77.27 Clostridium acetobutylicumNtrC family transcriptional regulator (PAS and AAA domains) 3.40.50.10660 89 6 75 3.48 4.64
1e0tA01 77.02 Purine metabolismPyruvate metabolismMetabolic pathwaysGlycolysis / GluconeogenesisMembrane 3.40.1380.20 123 11 72 2.91 4.02
2pjuA02 76.09 Positive regulation of gene-specific transcriptionPropionate catabolism operon regulatory proteinNegative regulation of gene-specific transcriptionEscherichia coli K-12Specific transcriptional repressor activity 3.40.50.10660 88 5 75 3.38 4.51
1jflA02 75.47 Aspartate racemase [EC:5.1.1.13]228aa long hypothetical aspartate racemasePyrococcus horikoshiiAlanine, aspartate and glutamate metabolism 3.40.50.1860 109 6 66 3.22 4.87
1sr8A03 75.13 Porphyrin and chlorophyll metabolismArchaeoglobus fulgidusCobalamin biosynthesis protein CbiDPutative cobalt-precorrin-6A synthase [deacetylating]Metabolic pathways 3.40.50.10720 90 11 65 3.10 4.72
1dljA02 73.97 Amino sugar and nucleotide sugar metabolismStarch and sucrose metabolismPentose and glucuronate interconversionsAscorbate and aldarate metabolismMetabolic pathways 3.40.50.1870 108 7 68 3.22 4.70
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Displaying entries 1 to 7 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1p5jA02
KIRGIGHFCKRWAKQGCAHFVCSSAGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLKNEGATCKVVGELLDEAFELA
KALAKNNPGWVYIPPF
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1p5jA02
KIRGIGHFCKRWAKQGCAHFVCSSAGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLKNEGATCKVVGELLDEAFELA
KALAKNNPGWVYIPPF
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 05 Mar 2006 23:32

Cut based on decision in database "DomChop" on "cathdb"