CATH Domain: 1p5jA01 XML data for domain: 1p5jA01

Molscript image for 1p5jA01
1p5jA01
PDB coordinates for domain 1p5jA01

PDB 1p5j, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.1100 Gene3D
3.40.50.1100.13
3.40.50.1100.13.1
3.40.50.1100.13.1.1
3.40.50.1100.13.1.1.1
3.40.50.1100.13.1.1.1.1

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Segment boundaries for domain 1p5jA01

Chopping figure for domain 1p5jA01
DomainStart PDB ResidueStop PDB Residue
1p5jA01 4 40
1p5jA01 137 322
1p5jA02 41 136

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 3.40.50.1100.13.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1tdjA01 86.17 Glycine, serine and threonine metabolismValine, leucine and isoleucine biosynthesisMetabolic pathwaysThreonine dehydratase biosyntheticL-threonine ammonia-lyase activity 3.40.50.1100 223 22 88 1.89 2.13
1v7cA01 83.82 Threonine synthase [EC:4.2.3.1]Vitamin B6 metabolismGlycine, serine and threonine metabolismThreonine synthaseMetabolic pathways 3.40.50.1100 254 20 81 3.40 4.15
1kl7A02 79.87 NucleusGlycine, serine and threonine metabolismProtein bindingThreonine synthaseMetabolic pathways 3.40.50.1100 256 9 77 3.85 4.98
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1p5jA01
GEPLHVKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFDDPLIWEGHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQG
LQECGWGDVPVIAMETFGAHSFHAATTAGKLVSLPKITSVAKALGVKTVGSQALKLFQEHPIFSEVISDQEAVAAIEKFV
DDEKILVEPACGAALAAVYSHVIQKLQLEGNLRTPLPSLVVIVCGGSNISLAQLRALKEQLGM
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1p5jA01
GEPLHVKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFDDPLIWEGHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQG
LQECGWGDVPVIAMETFGAHSFHAATTAGKLVSLPKITSVAKALGVKTVGSQALKLFQEHPIFSEVISDQEAVAAIEKFV
DDEKILVEPACGAALAAVYSHVIQKLQLEGNLRTPLPSLVVIVCGGSNISLAQLRALKEQLGMTNRLPKLEHHHHHH
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 05 Mar 2006 23:32

Cut based on decision in database "DomChop" on "cathdb"