CATH Domain: 1p5dX01 XML data for domain: 1p5dX01

Molscript image for 1p5dX01
1p5dX01
PDB coordinates for domain 1p5dX01

PDB 1p5d, Chain X, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.120 Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3
3.40.120.10 Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 Gene3D
3.40.120.10.2
3.40.120.10.2.1
3.40.120.10.2.1.1
3.40.120.10.2.1.1.1
3.40.120.10.2.1.1.1.1

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Segment boundaries for domain 1p5dX01

Chopping figure for domain 1p5dX01
DomainStart PDB ResidueStop PDB Residue
1p5dX01 9 154
1p5dX02 174 251
1p5dX03 252 370
1p5dX04 371 463

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 3.40.120.10.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1wqaA01 90.58 Galactose metabolismAmino sugar and nucleotide sugar metabolism455aa long hypothetical phospho-sugar mutasePyrococcus horikoshiiFructose and mannose metabolism 3.40.120.10 152 36 94 1.91 2.02
1tuoA01 88.77 Galactose metabolismAmino sugar and nucleotide sugar metabolismFructose and mannose metabolismMetabolic pathwaysStarch and sucrose metabolism 3.40.120.10 148 31 97 2.89 2.97
2fuvA01 81.74 Amino sugar and nucleotide sugar metabolismGalactose metabolismMetabolic pathwaysStarch and sucrose metabolismPentose phosphate pathway 3.40.120.10 204 24 71 2.72 3.83
3pmgA01 79.95 Phosphoglucomutase-1Oryctolagus cuniculus 3.40.120.10 196 19 73 2.91 3.96
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1p5dX01
LPASIFRAYDIRGVVGDTLTAETAYWIGRAIGSESLARGEPCVAVGRDGRLSGPELVKQLIQGLVDCGCQVSDVGMVPTP
VLYYAANVLEGKSGVMLTGHNPPDYNGFKIVVAGETLANEQIQALRERIEKNDLASGVGSVEQVD
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1p5dX01
MSTAKAPTLPASIFRAYDIRGVVGDTLTAETAYWIGRAIGSESLARGEPCVAVGRDGRLSGPELVKQLIQGLVDCGCQVS
DVGMVPTPVLYYAANVLEGKSGVMLTGXHNPPDYNGFKIVVAGETLANEQIQALRERIEKNDLASGVGSVEQVD
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:24

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:24

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:29

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"