CATH Domain: 1p3wA02 XML data for domain: 1p3wA02

Molscript image for 1p3wA02
1p3wA02
PDB coordinates for domain 1p3wA02

PDB 1p3w, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.640 Aspartate Aminotransferase; domain 2
3.40.640.10 Type I PLP-dependent aspartate aminotransferase-like (Major domain) Gene3D
3.40.640.10.31
3.40.640.10.31.1
3.40.640.10.31.1.1
3.40.640.10.31.1.1.1
3.40.640.10.31.1.1.1.1

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Segment boundaries for domain 1p3wA02

Chopping figure for domain 1p3wA02
DomainStart PDB ResidueStop PDB Residue
1p3wA01 3 15
1p3wA01 263 376
1p3wA02 16 262

Structural Neighbourhood (13 entries)

There are 13 matching structural neighberhood comparisons for CATH ID 3.40.640.10.31.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 13 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1m32A02 82.90 2-aminoethylphosphonate--pyruvate transaminaseSalmonella enterica subsp. enterica serovar Typhimurium2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]Phosphonate and phosphinate metabolismMetabolic pathways 3.40.640.10 237 16 89 3.17 3.56
1fc4A01 82.45 Glycine, serine and threonine metabolismMetal ion bindingLigase activity2-amino-3-ketobutyrate coenzyme A ligaseGlycine C-acetyltransferase [EC:2.3.1.29] 3.40.640.10 230 13 86 3.93 4.56
1xi9A02 81.12 Pyrococcus furiosusAminotransferase [EC:2.6.1.-]Alanine aminotransferase 3.40.640.10 242 11 87 3.34 3.80
3dydA02 80.55 Tyrosine metabolismL-tyrosine:2-oxoglutarate aminotransferase activityPhenylalanine metabolismMetabolic pathwaysUbiquinone and other terpenoid-quinone biosynthesis 3.40.640.10 244 13 87 3.36 3.84
1o4sA02 80.40 Tyrosine metabolismThermotoga maritimaArginine and proline metabolismAspartate aminotransferase [EC:2.6.1.1]Metabolic pathways 3.40.640.10 221 15 81 3.61 4.44
2gsaA02 80.22 Porphyrin and chlorophyll metabolismGlutamate-1-semialdehyde 2,1-aminomutaseGlutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]Synechococcus elongatus PCC 6301Metabolic pathways 3.40.640.10 249 12 86 3.51 4.07
1d2fA02 79.81 Nitrogen metabolismSelenoamino acid metabolismSulfur metabolismMetabolic pathwaysCysteine and methionine metabolism 3.40.640.10 243 12 87 3.14 3.59
3ftbA02 79.35 Tyrosine metabolismHistidinol-phosphate aminotransferase [EC:2.6.1.9]Histidine metabolismPhenylalanine metabolismMetabolic pathways 3.40.640.10 222 10 84 3.06 3.62
1gd9A02 79.28 Tyrosine metabolismArginine and proline metabolismAspartate aminotransferase [EC:2.6.1.1]Pyrococcus horikoshiiMetabolic pathways 3.40.640.10 223 13 81 3.61 4.44
3ffhB02 78.90 Tyrosine metabolismListeria innocuaHistidinol-phosphate aminotransferase [EC:2.6.1.9]Histidine metabolismMetabolic pathways 3.40.640.10 208 16 79 3.31 4.15
1c7nA02 78.78 Treponema denticolaHemolysin 3.40.640.10 225 9 80 3.04 3.77
1svvA01 78.66 Leishmania major strain FriedlinThreonine aldolase [EC:4.1.2.5]Glycine, serine and threonine metabolismMetabolic pathwaysPutative uncharacterized protein 3.40.640.10 242 14 85 3.51 4.11
1uu1A02 76.58 Thermotoga maritimaTyrosine metabolismHistidinol-phosphate aminotransferase [EC:2.6.1.9]Histidine metabolismMetabolic pathways 3.40.640.10 203 10 78 3.63 4.60
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Displaying entries 1 to 13 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1p3wA02
DPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATESDNLAIKGAANFYQKKGK
HIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCRARGI
IYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEA
YRIAKEE
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1p3wA02
DPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATESDNLAIKGAANFYQKKGK
HIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCRARGI
IYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEA
YRIAKEE
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:28

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:28

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:29

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"