CATH Domain: 1p3wA01 XML data for domain: 1p3wA01

Molscript image for 1p3wA01
1p3wA01
PDB coordinates for domain 1p3wA01

PDB 1p3w, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.90 Alpha-Beta Complex
3.90.1150 Aspartate Aminotransferase, domain 1
3.90.1150.10 Aspartate Aminotransferase, domain 1 Gene3D
3.90.1150.10.31
3.90.1150.10.31.1
3.90.1150.10.31.1.1
3.90.1150.10.31.1.1.1
3.90.1150.10.31.1.1.1.1

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Segment boundaries for domain 1p3wA01

Chopping figure for domain 1p3wA01
DomainStart PDB ResidueStop PDB Residue
1p3wA01 3 15
1p3wA01 263 376
1p3wA02 16 262

Structural Neighbourhood (16 entries)

There are 16 matching structural neighberhood comparisons for CATH ID 3.90.1150.10.31.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 16 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1eg5B01 89.75 Thermotoga maritimaThiamine metabolismCysteine desulfurase [EC:2.8.1.7]Aminotransferase, class V 3.90.1150.10 106 35 85 1.49 1.73
1m32A01 84.31 2-aminoethylphosphonate--pyruvate transaminaseSalmonella enterica subsp. enterica serovar Typhimurium2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]Phosphonate and phosphinate metabolismMetabolic pathways 3.90.1150.10 110 13 85 2.14 2.51
1jg8A02 83.01 Thermotoga maritimaThreonine aldolase [EC:4.1.2.5]Glycine, serine and threonine metabolismMetabolic pathwaysL-allo-threonine aldolase 3.90.1150.10 96 13 72 2.23 3.07
1d2fB01 82.36 Nitrogen metabolismSelenoamino acid metabolismSulfur metabolismMetabolic pathwaysCysteine and methionine metabolism 3.90.1150.10 124 8 84 3.24 3.83
3k40A03 81.67 Aromatic-L-amino-acid decarboxylase activityDopamine biosynthetic process from tyrosineAromatic-L-amino-acid decarboxylaseDevelopmental pigmentationSerotonin biosynthetic process from tryptophan 3.90.1150.10 99 11 70 2.08 2.96
3ftbA01 81.23 Tyrosine metabolismHistidinol-phosphate aminotransferase [EC:2.6.1.9]Histidine metabolismMetabolic pathwaysPhenylalanine metabolism 3.90.1150.10 112 12 85 2.86 3.36
1svvB02 80.87 Leishmania major strain FriedlinThreonine aldolase [EC:4.1.2.5]Glycine, serine and threonine metabolismMetabolic pathwaysPutative uncharacterized protein 3.90.1150.10 88 13 71 2.96 4.16
1uu2B01 80.84 Thermotoga maritimaTyrosine metabolismHistidinol-phosphate aminotransferase [EC:2.6.1.9]Histidine metabolismMetabolic pathways 3.90.1150.10 117 15 78 2.84 3.62
1uu1B01 80.65 Thermotoga maritimaTyrosine metabolismHistidinol-phosphate aminotransferase [EC:2.6.1.9]Histidine metabolismMetabolic pathways 3.90.1150.10 131 14 72 2.89 3.99
1iugA01 78.54 Thermus thermophilusAspartate aminotransferase 3.90.1150.10 111 9 85 2.76 3.24
1sffA01 76.86 Valine, leucine and isoleucine degradationPropanoate metabolismMetabolic pathwaysButanoate metabolismBeta-Alanine metabolism 3.90.1150.10 165 9 60 2.23 3.72
1ohvA01 74.59 Sus scrofaMitochondrial matrixSuccinate-semialdehyde dehydrogenase bindingProtein homodimerization activityPyridoxal phosphate binding 3.90.1150.10 166 7 60 3.00 4.93
3bv0A01 74.53 Biotin metabolismMetabolic pathwaysAdenosylmethionine-8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]Adenosylmethionine-8-amino-7-oxononanoate aminotransferaseMycobacterium tuberculosis 3.90.1150.10 151 7 64 2.83 4.36
1rv3A01 74.39 Oryctolagus cuniculusSerine hydroxymethyltransferase, cytosolic 3.90.1150.10 170 9 58 2.79 4.74
1tplA01 74.26 Citrobacter freundiiTyrosine phenol-lyase 3.90.1150.10 181 11 56 2.75 4.88
1c4kA03 72.40 Lactobacillus sp. 30AOrnithine decarboxylase, inducible 3.90.1150.10 180 9 46 2.18 4.67
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Displaying entries 1 to 16 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1p3wA01
LPIYLDYSATTPVMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVEGESLIMALKDLAVSSGSAEP
SYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKS
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1p3wA01
LPIYLDYSATTPVMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVEGESLIMALKDLAVSSGSACT
SASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKS
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:37

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:37

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:29

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"