CATH Domain: 1p1xB00 XML data for domain: 1p1xB00

Molscript image for 1p1xB00
1p1xB00
PDB coordinates for domain 1p1xB00

PDB 1p1x, Chain B, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.20 TIM Barrel
3.20.20.70 Aldolase class I Gene3D
3.20.20.70.2
3.20.20.70.2.1
3.20.20.70.2.1.1
3.20.20.70.2.1.1.1
3.20.20.70.2.1.1.1.1

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Segment boundaries for domain 1p1xB00

Chopping figure for domain 1p1xB00
DomainStart PDB ResidueStop PDB Residue
1p1xB00 1000 1250

Structural Neighbourhood (16 entries)

There are 16 matching structural neighberhood comparisons for CATH ID 3.20.20.70.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 16 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1ub3A00 88.30 Thermus thermophilus HB8Deoxyribose-phosphate aldolasePentose phosphate pathwayDeoxyribose-phosphate aldolase [EC:4.1.2.4] 3.20.20.70 211 32 84 1.65 1.96
1vcvA00 87.52 Pyrobaculum aerophilumProbable deoxyribose-phosphate aldolasePentose phosphate pathwayDeoxyribose-phosphate aldolase [EC:4.1.2.4] 3.20.20.70 226 27 86 1.62 1.88
1n7kA00 87.52 Aeropyrum pernixProbable deoxyribose-phosphate aldolasePentose phosphate pathwayDeoxyribose-phosphate aldolase [EC:4.1.2.4] 3.20.20.70 234 21 89 2.78 3.10
3f4wA00 79.68 Pentose and glucuronate interconversionsMethane metabolismPutative hexulose 6 phosphate synthaseSalmonella enterica subsp. enterica serovar Typhimurium3-hexulose-6-phosphate synthase [EC:4.1.2.43] 3.20.20.70 211 14 74 3.04 4.08
1l6wA00 78.43 Fructose-6-phosphate aldolase 1Fructose-6-phosphate aldolase 1 [EC:4.1.2.-]Escherichia coli K-12 3.20.20.70 220 9 72 3.41 4.68
1q6oB00 78.36 Ascorbate and aldarate metabolism3-keto-L-gulonate-6-phosphate decarboxylase ulaDMagnesium ion binding3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]3-dehydro-L-gulonate-6-phosphate decarboxylase activity 3.20.20.70 215 11 74 3.36 4.53
3ldvA00 78.30 Pyrimidine metabolismMetabolic pathwaysVibrio choleraeOrotidine 5'-phosphate decarboxylaseOrotidine-5'-phosphate decarboxylase [EC:4.1.1.23] 3.20.20.70 231 11 75 3.61 4.77
1dvjA00 78.09 Pyrimidine metabolismMethanothermobacter thermautotrophicus str. Delta HOrotidine 5'-phosphate decarboxylaseOrotidine-5'-phosphate decarboxylase [EC:4.1.1.23]Metabolic pathways 3.20.20.70 239 12 76 3.77 4.93
1thfD00 77.79 Thermotoga maritimaCyclase HisF [EC:4.1.3.-]Imidazole glycerol phosphate synthase subunit hisFHistidine metabolismMetabolic pathways 3.20.20.70 253 9 75 3.50 4.64
1twdB00 77.72 Shigella flexneriCopper homeostasis proteinCopper homeostasis protein cutC 3.20.20.380 226 9 73 3.58 4.88
1wx0A00 77.38 Thermus thermophilus HB8Transaldolase [EC:2.2.1.2]Pentose phosphate pathwayMetabolic pathwaysProbable transaldolase 3.20.20.70 211 13 73 3.49 4.76
2fliC00 77.29 Pentose phosphate pathwayPentose and glucuronate interconversionsMetabolic pathwaysRibulose-phosphate 3-epimerase [EC:5.1.3.1]Streptococcus pyogenes serotype M1 3.20.20.70 219 12 75 3.66 4.84
1w5qB00 76.05 Porphyrin and chlorophyll metabolismMetabolic pathwaysPorphobilinogen synthase [EC:4.2.1.24]Pseudomonas aeruginosaDelta-aminolevulinic acid dehydratase 3.20.20.70 318 9 65 3.20 4.92
1vhnA01 75.57 Thermotoga maritimaPutative uncharacterized protein 3.20.20.70 231 8 76 3.72 4.89
1nsjA00 73.95 Thermotoga maritimaN-(5'-phosphoribosyl)anthranilate isomerasePhenylalanine, tyrosine and tryptophan biosynthesisPhosphoribosylanthranilate isomerase [EC:5.3.1.24]Metabolic pathways 3.20.20.70 205 8 70 3.22 4.59
1piiA02 72.67 Phenylalanine, tyrosine and tryptophan biosynthesisTryptophan biosynthesis protein trpCFIndole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]Phosphoribosylanthranilate isomerase activityIndole-3-glycerol-phosphate synthase activity 3.20.20.70 190 8 65 3.09 4.73
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Displaying entries 1 to 16 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1p1xB00
HMTDLKASSLRALKLMDLTTLNDDDTDEKVIALCHQAKTPVGNTAAICIYPRFIPIARKTLKEQGTPEIRIATVTNFPHG
NDDIDIALAETRAAIAYGADEVDVVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISI
KAGADFIKTSTGKVAVNATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAIADELFGADWADARHYRFGASS
LLASLLKALGH
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1p1xB00
HMTDLKASSLRALKLMDLTTLNDDDTDEKVIALCHQAKTPVGNTAAICIYPRFIPIARKTLKEQGTPEIRIATVTNFPHG
NDDIDIALAETRAAIAYGADEVDVVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISI
KAGADFIKTSTGKVAVNATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAIADELFGADWADARHYRFGASS
LLASLLKALGHGDGKSASSY
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:54

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:54

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:19

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"