CATH Domain: 1p1aA00 XML data for domain: 1p1aA00

Molscript image for 1p1aA00
1p1aA00
PDB coordinates for domain 1p1aA00

PDB 1p1a, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.10 Roll
3.10.20 Ubiquitin-like (UB roll)
3.10.20.90 Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 Gene3D
3.10.20.90.29
3.10.20.90.29.1
3.10.20.90.29.1.1
3.10.20.90.29.1.1.1
3.10.20.90.29.1.1.1.1

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Segment boundaries for domain 1p1aA00

Chopping figure for domain 1p1aA00
DomainStart PDB ResidueStop PDB Residue
1p1aA00 1 85

Structural Neighbourhood (23 entries)

There are 23 matching structural neighberhood comparisons for CATH ID 3.10.20.90.29.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 23 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1wh3A01 87.98 CytoplasmDNA binding59 kDa 2'-5'-oligoadenylate synthase-like proteinThyroid hormone receptor bindingNucleolus 3.10.20.90 71 26 83 1.35 1.62
1oqyA01 87.93 Nucleotide excision repairNucleotide-excision repairUV excision repair protein RAD23 homolog ASingle-stranded DNA bindingHomo sapiens 3.10.20.90 79 75 92 1.68 1.81
1m94A00 86.62 Ubiquitin-like protein 5Protein modification processProtein bindingNuclear mRNA splicing, via spliceosomeMating projection 3.10.20.90 73 15 85 1.71 1.99
2kd0A01 85.26 LRR repeats and ubiquitin-like domain-containing protein At2g30105Arabidopsis thaliana 3.10.20.90 71 26 83 1.62 1.94
3ge3C00 85.04 Pseudomonas mendocinaToluene-4-monooxygenase system protein B 3.10.20.270 83 9 91 2.81 3.06
1v5oA00 84.59 Mus musculusDNA damage-inducible protein 1Protein DDI1 homolog 1 3.10.20.90 102 21 80 2.55 3.17
1uh6A00 83.86 Mus musculusUbiquitin-like protein 5Ubiquitin-like protein 5 3.10.20.90 100 14 75 1.83 2.44
1wgdA00 83.31 Endoplasmic reticulum membraneHomo sapiensHomocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 proteinProtein binding 3.10.20.90 93 18 90 3.76 4.16
1v5tA00 83.00 Mus musculusUbiquitin-like domain-containing CTD phosphatase 1Protein phosphatase [EC:3.1.3.16] 3.10.20.90 90 20 90 4.20 4.67
1wxmA01 82.79 Bladder cancerPathways in cancerNon-small cell lung cancerAcute myeloid leukemiaProtein binding 3.10.20.90 71 12 78 2.34 2.97
1h8cA00 82.69 Cytoplasmic sequestering of NF-kappaBHeat shock protein bindingFAS-associated factor 1CytosolPositive regulation of protein complex assembly 3.10.20.90 82 12 88 2.76 3.13
1wmhA00 82.18 Tight junctionInsulin signaling pathwayEndocytosisVesicle-mediated transportProtein binding 3.10.20.240 83 9 83 2.40 2.87
1v86A00 82.10 Mus musculusPutative uncharacterized protein 3.10.20.90 95 21 82 3.74 4.56
1se9A00 81.32 Membrane-anchored ubiquitin-fold protein 1Arabidopsis thaliana 3.10.20.90 101 23 84 3.54 4.21
2c60A01 81.07 Neurotrophin signaling pathwayMitogen-activated protein kinase kinase kinase 3MAPKKK cascadeProtein bindingPositive regulation of I-kappaB kinase/NF-kappaB cascade 3.10.20.240 77 9 80 2.47 3.09
1wmhB00 80.71 Partitioning defective 6 homolog alphaTranscription factor bindingViral reproductionHomo sapiens 3.10.20.240 82 12 85 2.70 3.14
2nptB01 80.48 Mitogen-activated protein kinase kinase kinase 2Gap junctionMitogen-activated protein kinase kinase kinase 2 [EC:2.7.11.25]GnRH signaling pathwayMAPK signaling pathway 3.10.20.240 81 9 82 2.59 3.15
1j8cA00 80.02 CytoplasmPlasma membraneHomo sapiensUbiquilinUbiquilin-2 3.10.20.90 103 22 71 2.07 2.88
1ip9A00 79.92 MAPK signaling pathway - yeastMating projection tipIdentical protein bindingEstablishment of cell polarityPhosphatidylinositol-3-phosphate binding 3.10.20.240 85 12 83 2.69 3.22
1wxsA00 79.28 CytoplasmUbiquitin-fold modifier 1NucleusProtein ufmylationHomo sapiens 3.10.20.90 88 8 87 3.02 3.45
2nptC01 77.92 Homo sapiensProtein bindingDual specificity mitogen-activated protein kinase kinase 5 3.10.20.240 88 5 78 3.26 4.16
2kfjA00 77.01 Cell division control protein 24MAPK signaling pathway - yeastMating projection tipInvasive growth in response to glucose limitationCell division control protein 24 3.10.20.240 86 10 84 3.90 4.59
1i42A00 73.14 Rattus norvegicusGolgi organizationCellular membrane fusionNSFL1 cofactor p47Protein binding 3.10.20.90 89 9 79 3.76 4.71
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Displaying entries 1 to 23 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1p1aA00
GSHMQVTLKTLQQQTFKIDIDPEETVKALKEKIESEKGKDAFPVAGQKLIYAGKILNDDTALKEYKIDEKNFVVVMVTKP
KAVST
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1p1aA00
GSHMQVTLKTLQQQTFKIDIDPEETVKALKEKIESEKGKDAFPVAGQKLIYAGKILNDDTALKEYKIDEKNFVVVMVTKP
KAVST
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:50

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:50

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:12

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"