CATH Domain: 1oznA00 XML data for domain: 1oznA00

Molscript image for 1oznA00
1oznA00
PDB coordinates for domain 1oznA00

PDB 1ozn, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.80 Alpha-Beta Horseshoe
3.80.10 Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
3.80.10.10 Ribonuclease Inhibitor Gene3D
3.80.10.10.1
3.80.10.10.1.1
3.80.10.10.1.1.1
3.80.10.10.1.1.1.1
3.80.10.10.1.1.1.1.1

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Segment boundaries for domain 1oznA00

Chopping figure for domain 1oznA00
DomainStart PDB ResidueStop PDB Residue
1oznA00 26 309

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 3.80.10.10.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1p9aG00 83.79 FibrinolysisMembrane fractionIntegral to plasma membraneCell adhesionProtein binding 3.80.10.10 266 23 86 3.83 4.42
1xkuA00 83.68 TGF-beta signaling pathwayBos taurusDecorinProtein bindingDecorin 3.80.10.10 305 20 86 4.14 4.78
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1oznA00
PCPGACVCYNEPKVTTSCPQQGLQAVPVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLA
LLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFL
HGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCD
CRARPLWAWLQKFRGSSSEVPCSLPQRLAGRDLKRLAANDLQGC
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1oznA00
PCPGACVCYNEPKVTTSCPQQGLQAVPVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLA
LLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFL
HGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCD
CRARPLWAWLQKFRGSSSEVPCSLPQRLAGRDLKRLAANDLQGCA
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:32

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:32

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:55

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"