CATH Domain: 1oxxK03 XML data for domain: 1oxxK03

Molscript image for 1oxxK03
1oxxK03
PDB coordinates for domain 1oxxK03

PDB 1oxx, Chain K, Domain 3

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.40 Beta Barrel
2.40.50 OB fold (Dihydrolipoamide Acetyltransferase, E2P)
2.40.50.100 Gene3D
2.40.50.100.13
2.40.50.100.13.1
2.40.50.100.13.1.1
2.40.50.100.13.1.1.1
2.40.50.100.13.1.1.1.1

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Segment boundaries for domain 1oxxK03

Chopping figure for domain 1oxxK03
DomainStart PDB ResidueStop PDB Residue
1oxxK01 1 244
1oxxK02 297 341
1oxxK03 245 279
1oxxK03 343 352

Structural Neighbourhood (9 entries)

There are 9 matching structural neighberhood comparisons for CATH ID 2.40.50.100.13.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 9 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3d31A02 86.57 Methanosarcina acetivoransPutative sulfate transport system ATP-binding proteinSulfate/molybdate ABC transporter, ATP-binding proteinABC transporters 2.40.50.140 46 15 82 1.98 2.40
1g29102 79.66 Maltose transport protein MalKThermococcus litoralis 2.40.50.140 45 11 64 3.18 4.93
1bkbA02 77.15 Pyrobaculum aerophilumTranslation initiation factor 5A 2.40.50.140 62 4 67 3.04 4.49
2p5zX04 76.80 Escherichia coli O6Putative uncharacterized protein 2.40.50.230 65 17 67 3.33 4.92
2r7dA03 76.63 Exoribonuclease II [EC:3.1.13.1]Ribonuclease II family proteinDeinococcus radiodurans 2.40.50.140 59 6 76 3.74 4.90
1ektA00 76.30 2.10.260.10 53 24 79 3.67 4.63
1uebA03 76.10 Thermus thermophilus HB8Elongation factor EF-PElongation factor P 2.40.50.140 58 11 67 3.10 4.61
3cp0A00 76.04 Corynebacterium glutamicumMembrane protein implicated in regulation of membrane protease activity 2.40.50.140 62 6 69 2.86 4.12
1rl2A01 70.55 Geobacillus stearothermophilus50S ribosomal protein L2 2.40.50.140 55 4 54 2.67 4.89
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Displaying entries 1 to 9 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1oxxK03
NELEGKVTNEGVVIGSLRFPVSVSSDRAIIGIRPERKDKIKVFEK
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1oxxK03
NELEGKVTNEGVVIGSLRFPVSVSSDRAIIGIRPERKDKIKVFEKN
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:30

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:30

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:28

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"