CATH Domain: 1otvA00 XML data for domain: 1otvA00

Molscript image for 1otvA00
1otvA00
PDB coordinates for domain 1otvA00

PDB 1otv, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.20 Up-down Bundle
1.20.910 Heme Oxygenase; Chain A
1.20.910.10 Heme Oxygenase; Chain A Gene3D
1.20.910.10.9
1.20.910.10.9.1
1.20.910.10.9.1.1
1.20.910.10.9.1.1.4
1.20.910.10.9.1.1.4.1

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Segment boundaries for domain 1otvA00

Chopping figure for domain 1otvA00
DomainStart PDB ResidueStop PDB Residue
1otvA00 2 255

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 1.20.910.10.9.1.1.4.1 (SIMAX score < 5)

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Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1rcwB00 85.50 Chlamydia trachomatisPqqC-like proteinPyrroloquinoline-quinone synthase [EC:1.3.3.11] 1.20.910.10 210 17 82 2.03 2.46
1rtwB00 78.40 Pyrococcus furiosusTranscriptional activator, putative 1.20.910.10 204 11 78 3.07 3.93
2qcxA00 77.91 Thiamine metabolismBacillus subtilisThiaminase-2Transcriptional activator TenA [EC:3.5.99.2] 1.20.910.10 222 10 84 3.88 4.59
1uddA00 76.14 Thiamine metabolismPyrococcus horikoshiiTranscriptional activator TenA [EC:3.5.99.2]218aa long hypothetical transcriptional regulator 1.20.910.10 215 12 79 3.74 4.69
2f2gA00 75.35 Seed maturation protein PM36 homologArabidopsis thaliana 1.20.910.10 211 9 79 3.70 4.64
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Displaying entries 1 to 5 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1otvA00
LITDTLSPQAFEEALRAKGDFYHIHHPYHIAMHNGDATRKQIQGWVANRFYYQTTIPLKDAAIMANCPDAQTRRKWVQRI
LDHDGSHGEDGGIEAWLRLGEAVGLSRDDLLSERHVLPGVRFAVDAYLNFARRACWQEAACSSLTELFAPQIHQSRLDSW
PQHYPWIKEEGYFYFRSRLSQANRDVEHGLALAKAYCDSAEKQNRMLEILQFKLDILWSMLDAMTMAYALQRPPYHTVTD
KAAWHTTRLVLEHH
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1otvA00
MLITDTLSPQAFEEALRAKGDFYHIHHPYHIAMHNGDATRKQIQGWVANRFYYQTTIPLKDAAIMANCPDAQTRRKWVQR
ILDHDGSHGEDGGIEAWLRLGEAVGLSRDDLLSERHVLPGVRFAVDAYLNFARRACWQEAACSSLTELFAPQIHQSRLDS
WPQHYPWIKEEGYFYFRSRLSQANRDVEHGLALAKAYCDSAEKQNRMLEILQFKLDILWSMLDAMTMAYALQRPPYHTVT
DKAAWHTTRLVLEHHHHHH
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 05 Mar 2006 23:31

Cut based on decision in database "DomChop" on "cathdb"