CATH Domain: 1onwB02 XML data for domain: 1onwB02

Molscript image for 1onwB02
1onwB02
PDB coordinates for domain 1onwB02

PDB 1onw, Chain B, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.20 TIM Barrel
3.20.20.140 Metal-dependent hydrolases Gene3D
3.20.20.140.18
3.20.20.140.18.1
3.20.20.140.18.1.1
3.20.20.140.18.1.1.1
3.20.20.140.18.1.1.1.1

[top]
Segment boundaries for domain 1onwB02

Chopping figure for domain 1onwB02
DomainStart PDB ResidueStop PDB Residue
1onwB01 1 63
1onwB01 343 389
1onwB02 64 342

Structural Neighbourhood (9 entries)

There are 9 matching structural neighberhood comparisons for CATH ID 3.20.20.140.18.1.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 9 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2ogjA02 77.91 Pyrimidine metabolismAgrobacterium tumefaciens str. C58Dihydroorotase [EC:3.5.2.3]Metabolic pathwaysPutative uncharacterized protein 3.20.20.140 256 14 84 3.72 4.39
2icsA02 77.73 Pyrimidine metabolismDihydroorotase [EC:3.5.2.3]Metabolic pathwaysEnterococcus faecalisPutative uncharacterized protein 3.20.20.140 260 15 84 3.72 4.43
1j6oA00 77.72 Thermotoga maritimaTatD DNase family protein [EC:3.1.21.-]Putative uncharacterized protein 3.20.20.140 259 13 87 3.53 4.04
2ffiA00 76.68 Pseudomonas putida KT24402-pyrone-4,6-dicarboxylic acid hydrolase, putative 3.20.20.140 268 13 87 3.91 4.46
1zzmA00 76.37 Uncharacterized deoxyribonuclease yjjVTatD DNase family protein [EC:3.1.21.-]Escherichia coli K-12 3.20.20.140 259 15 83 3.32 3.99
3cjpA00 75.86 Predicted amidohodrolase (Dihydroorotase family)Clostridium acetobutylicum 3.20.20.140 260 13 82 3.52 4.27
2qahA00 74.62 Sphingomonas paucimobilis2-pyrone-4,6-dicarbaxylate hydrolase 3.20.20.140 294 8 81 3.57 4.37
2f6kA00 74.49 Metal-dependent hydrolase (Putative)Lactobacillus plantarum 3.20.20.140 300 7 79 3.79 4.78
1kcxA02 73.48 Mus musculusDendriteDihydropyrimidinase-related protein 1Neuronal cell body 3.20.20.140 373 8 65 3.27 4.96
[1]
Displaying entries 1 to 9 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|1onwB02
FIDQHVHLIGGGGEAGPTTRTPEVALSRLTEAGVTSVVGLLGTDSISRHPESLLAKTRALNEEGISAWMLTGAYHVPSRT
ITGSVEKDVAIIDRVIGVCAISDHRSAAPDVYHLANMAAESRVGGLLGGKPGVTVFHMGDSKKALQPIYDLLENCDVPIS
KLLPTHVNRNVPLFEQALEFARKGGTIDITSSIDEPVAPAEGIARAVQAGIPLARVTLSSDGNGSQPHIGVAGFETLLET
VQVLVKDYDFSISDALRPLTSSVAGFLNL
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|1onwB02
FIDQHVHLIGGGGEAGPTTRTPEVALSRLTEAGVTSVVGLLGTDSISRHPESLLAKTRALNEEGISAWMLTGAYHVPSRT
ITGSVEKDVAIIDRVIGVXCAISDHRSAAPDVYHLANMAAESRVGGLLGGKPGVTVFHMGDSKKALQPIYDLLENCDVPI
SKLLPTHVNRNVPLFEQALEFARKGGTIDITSSIDEPVAPAEGIARAVQAGIPLARVTLSSDGNGSQPFFDDEGNLTHIG
VAGFETLLETVQVLVKDYDFSISDALRPLTSSVAGFLNL
BLAST against CATH

[top]
Domain History Events (6)

Domain assigned by auto on 28 Nov 2006 18:26

Assigning to "3.20.20.140" based on similarity with "1onwA02"

Flow stage update by auto on 28 Nov 2006 18:22

No in_process hits for Domain "1onwB02" ready to be processed

Flow stage update by auto on 28 Nov 2006 18:22

NW result present for Domain "1onwB02"

Flow stage update by auto on 28 Nov 2006 18:21

All required files are present for Domain "1onwB02"

Flow stage update by auto on 28 Nov 2006 18:21

Beginning processing for Domain "1onwB02"

Insertion by cuff on 24 Nov 2006 10:58

Nice batch of easy choppings.