CATH Domain: 1onwA01 XML data for domain: 1onwA01

Molscript image for 1onwA01
1onwA01
PDB coordinates for domain 1onwA01

PDB 1onw, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.30 Roll
2.30.40 Urease, subunit C; domain 1
2.30.40.10 Urease, subunit C, domain 1 Gene3D
2.30.40.10.3
2.30.40.10.3.1
2.30.40.10.3.1.1
2.30.40.10.3.1.1.1
2.30.40.10.3.1.1.1.1

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Segment boundaries for domain 1onwA01

Chopping figure for domain 1onwA01
DomainStart PDB ResidueStop PDB Residue
1onwA01 1 63
1onwA01 343 389
1onwA02 64 342

Structural Neighbourhood (19 entries)

There are 19 matching structural neighberhood comparisons for CATH ID 2.30.40.10.3.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 19 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3feqA01 88.38 2.30.40.10 105 25 80 1.55 1.92
2vhlB01 87.83 Amino sugar and nucleotide sugar metabolismN-acetylglucosamine-6-phosphate deacetylaseBacillus subtilisN-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] 2.30.40.10 92 20 81 2.55 3.12
2gwnA01 87.51 Pyrimidine metabolismDihydroorotaseDihydroorotase [EC:3.5.2.3]Porphyromonas gingivalisMetabolic pathways 2.30.40.10 96 21 82 2.17 2.62
2qt3A01 87.24 N-isopropylammelide isopropyl amidohydrolasePseudomonas sp. ADP 2.30.40.10 100 22 82 2.02 2.44
2pajA01 87.13 2.30.40.10 119 18 75 1.54 2.04
1rk6A01 86.92 D-aminoacylaseAlcaligenes faecalis 2.30.40.10 87 25 77 1.88 2.43
1yrrA01 86.25 Amino sugar and nucleotide sugar metabolismEscherichia coli O157:H7N-acetylglucosamine-6-phosphate deacetylaseN-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] 2.30.40.10 92 23 80 2.06 2.55
1gkpA01 86.03 HydrolaseThermus sp. 2.30.40.10 81 28 73 1.59 2.16
2p9bA01 85.92 Possible prolidase (X-Pro dipeptidase) or chlorohydrolaseBifidobacterium longum 2.30.40.10 101 21 80 2.55 3.19
2i9uA01 85.90 Cytosine/guanine deaminase related proteinGuanine deaminase [EC:3.5.4.3]Purine metabolismMetabolic pathwaysClostridium acetobutylicum 2.30.40.10 111 18 74 2.12 2.84
2qs8A01 85.81 2.30.40.10 99 18 79 2.45 3.10
1p1mA01 85.46 Thermotoga maritima5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.- 3.5.4.28]5-methylthioadenosine/S-adenosylhomocysteine deaminase 2.30.40.10 103 19 74 1.92 2.58
1gkrA01 85.22 L-hydantoinaseArthrobacter aurescens 2.30.40.10 87 22 79 2.00 2.53
2icsA01 85.02 Pyrimidine metabolismDihydroorotase [EC:3.5.2.3]Metabolic pathwaysEnterococcus faecalisPutative uncharacterized protein 2.30.40.10 100 18 72 1.97 2.71
3be7A01 84.50 2.30.40.10 95 24 77 2.56 3.31
1o12A01 84.37 Amino sugar and nucleotide sugar metabolismThermotoga maritimaN-acetylglucosamine-6-phosphate deacetylaseN-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] 2.30.40.10 72 20 64 2.93 4.54
1gkrB01 83.73 L-hydantoinaseArthrobacter aurescens 2.30.40.10 130 21 77 3.21 4.13
1kcxA01 83.40 Mus musculusDendriteDihydropyrimidinase-related protein 1Neuronal cell body 2.30.40.10 103 14 72 3.50 4.81
2oodA01 80.27 Bradyrhizobium japonicumGuanine deaminase [EC:3.5.4.3]Purine metabolismBlr3880 proteinMetabolic pathways 2.30.40.10 135 13 63 2.52 3.96
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Displaying entries 1 to 19 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1onwA01
MIDYTAAGFTLLQGAHLYAPEDRGICDVLVANGKIIAVASNIPSDIVPNCTVVDLSGQILCPGTGKGEILPGNDADLLVM
TPELRIEQVYARGKLMVKDGKACVKGTFET
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1onwA01
MIDYTAAGFTLLQGAHLYAPEDRGICDVLVANGKIIAVASNIPSDIVPNCTVVDLSGQILCPGTGKGEILPGNDADLLVM
TPELRIEQVYARGKLMVKDGKACVKGTFETA
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 05 Mar 2006 17:27

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"