CATH Domain: 1olrA00 XML data for domain: 1olrA00

Molscript image for 1olrA00
1olrA00
PDB coordinates for domain 1olrA00

PDB 1olr, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.120 Jelly Rolls
2.60.120.180 Gene3D
2.60.120.180.3
2.60.120.180.3.1
2.60.120.180.3.1.1
2.60.120.180.3.1.1.1
2.60.120.180.3.1.1.1.1

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Segment boundaries for domain 1olrA00

Chopping figure for domain 1olrA00
DomainStart PDB ResidueStop PDB Residue
1olrA00 2 224

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 2.60.120.180.3.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2bw8A00 86.89 Rhodothermus marinusCellulase 2.60.120.180 226 23 93 1.86 1.99
2vg9A00 83.11 Neocallimastix patriciarumBifunctional endo-1,4-beta-xylanase A 2.60.120.180 217 9 90 3.09 3.43
1t6gC00 78.72 Aspergillus nigerEndo-1,4-beta-xylanase A 2.60.120.180 182 13 77 2.98 3.86
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1olrA00
IRSLCELYGYWSGNGYELLNNLWGKDTATSGWQCTYLDGTNNGGIQWSTAWEWQGAPDNVKSYPYVGKQIQRGRKISDIN
SMRTSVSWTYDRTDIRANVAYDVFTARDPDHPNWGGDYELMIWLARYGGIYPIGTFHSQVNLAGRTWDLWTGYNGNMRVY
SFLPPSGDIRDFSCDIKDFFNYLERNHGYPAREQNLIVYQVGTECFTGGPARFTCRDFRADLW
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1olrA00
XIRSLCELYGYWSGNGYELLNNLWGKDTATSGWQCTYLDGTNNGGIQWSTAWEWQGAPDNVKSYPYVGKQIQRGRKISDI
NSMRTSVSWTYDRTDIRANVAYDVFTARDPDHPNWGGDYELMIWLARYGGIYPIGTFHSQVNLAGRTWDLWTGYNGNMRV
YSFLPPSGDIRDFSCDIKDFFNYLERNHGYPAREQNLIVYQVGTECFTGGPARFTCRDFRADLW
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:45

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:45

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:05

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"