CATH Domain: 1oksA00 XML data for domain: 1oksA00

Molscript image for 1oksA00
1oksA00
PDB coordinates for domain 1oksA00

PDB 1oks, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.8 Helicase, Ruva Protein; domain 3
1.10.8.10 DNA helicase RuvA subunit, C-terminal domain Gene3D
1.10.8.10.3
1.10.8.10.3.1
1.10.8.10.3.1.1
1.10.8.10.3.1.1.1
1.10.8.10.3.1.1.1.1

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Segment boundaries for domain 1oksA00

Chopping figure for domain 1oksA00
DomainStart PDB ResidueStop PDB Residue
1oksA00 2 55

Structural Neighbourhood (6 entries)

There are 6 matching structural neighberhood comparisons for CATH ID 1.10.8.10.3.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 6 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1t6oA00 95.84 Measles virus strain MoratenPhosphoprotein 1.10.8.10 49 89 92 0.72 0.78
1xvhA02 88.56 Extracellular matrix-binding protein ebhStaphylococcus aureus subsp. aureus MW2 1.20.5.420 55 8 83 1.87 2.24
1deeG00 88.38 Staphylococcus aureus subsp. aureus NCTC 8325Immunoglobulin G-binding protein A 1.20.5.420 51 12 92 1.82 1.97
1lp1B00 87.20 Staphylococcus aureusImmunoglobulin G-binding protein A 1.20.5.420 54 14 88 2.22 2.50
2j5yA00 81.60 Peptostreptococcal albumin-binding proteinFinegoldia magna 1.10.8.40 61 6 70 2.38 3.38
1ixrB03 74.73 Homologous recombinationThermus thermophilus HB8Holliday junction ATP-dependent DNA helicase ruvAHolliday junction DNA helicase RuvAProtein binding 1.10.8.10 53 10 84 4.17 4.91
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Displaying entries 1 to 6 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1oksA00
ASRSVIRSIIKSSRLEEDRKRYLTLLDDIKGANDLAKFHQLVKIIKHHHHH
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1oksA00
XASRSVIRSIIKSSRLEEDRKRYLXTLLDDIKGANDLAKFHQXLVKIIXKHHHHHH
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 05 Mar 2006 23:31

Cut based on decision in database "DomChop" on "cathdb"