CATH Domain: 1okiA02 XML data for domain: 1okiA02

Molscript image for 1okiA02
1okiA02
PDB coordinates for domain 1okiA02

PDB 1oki, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.20 Gamma-B Crystallin; domain 1
2.60.20.10 Crystallins Gene3D
2.60.20.10.4
2.60.20.10.4.1
2.60.20.10.4.1.1
2.60.20.10.4.1.1.1
2.60.20.10.4.1.1.1.1

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Segment boundaries for domain 1okiA02

Chopping figure for domain 1okiA02
DomainStart PDB ResidueStop PDB Residue
1okiA01 54 144
1okiA02 145 236

Structural Neighbourhood (6 entries)

There are 6 matching structural neighberhood comparisons for CATH ID 2.60.20.10.4.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 6 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2bv2A00 92.58 2.60.20.10 83 34 90 1.05 1.16
1ytqA01 92.03 Beta-crystallin B2Visual perceptionHomo sapiens 2.60.20.10 86 33 91 1.52 1.66
1npsA00 87.79 Myxococcus xanthusDevelopment-specific protein S 2.60.20.10 87 19 90 2.30 2.55
3hzbC00 87.55 Predicted carbohydrate binding proteinFlavobacterium johnsoniae UW101 2.60.20.10 88 17 91 2.68 2.94
1hdfA00 87.45 Spherulin-3APhysarum polycephalum 2.60.20.10 99 15 87 2.87 3.27
1c01A00 79.09 Macadamia integrifoliaAntimicrobial peptide 1 2.60.20.30 76 10 78 2.68 3.42
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Displaying entries 1 to 6 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1okiA02
AQEHKISLFEGANFKGNTIEIQGDDAPSLWVYGFSDRVGSVKVSSGTWVGYQYPGYRGYQYLLEPGDFRHWNEWGAFQPQ
MQSLRRLRDKQW
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1okiA02
AQEHKISLFEGANFKGNTIEIQGDDAPSLWVYGFSDRVGSVKVSSGTWVGYQYPGYRGYQYLLEPGDFRHWNEWGAFQPQ
MQSLRRLRDKQWHLEGSFPVLATEPPK
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 05 Mar 2006 23:31

Cut based on decision in database "DomChop" on "cathdb"