CATH Domain: 1okgA01 XML data for domain: 1okgA01

Molscript image for 1okgA01
1okgA01
PDB coordinates for domain 1okgA01

PDB 1okg, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.250 Oxidized Rhodanese; domain 1
3.40.250.10 Oxidized Rhodanese, domain 1 Gene3D
3.40.250.10.11
3.40.250.10.11.1
3.40.250.10.11.1.1
3.40.250.10.11.1.1.1
3.40.250.10.11.1.1.1.1

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Segment boundaries for domain 1okgA01

Chopping figure for domain 1okgA01
DomainStart PDB ResidueStop PDB Residue
1okgA01 7 161
1okgA02 162 303
1okgA03 305 373

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 3.40.250.10.11.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1e0cA02 80.66 Azotobacter vinelandiiThiosulfate sulfurtransferaseThiosulfate sulfurtransferase [EC:2.8.1.1] 3.40.250.10 126 8 73 1.88 2.55
1urhA02 78.10 Cysteine and methionine metabolismMetabolic pathways3-mercaptopyruvate sulfurtransferase [EC:2.8.1.2]3-mercaptopyruvate sulfurtransferase activityEscherichia coli K-12 3.40.250.10 114 10 67 3.01 4.48
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1okgA01
APKHPGKVFLDPSEVADHLAEYRIVDCRYSLKIKDHGSIQYAKEHVKSAIRADVDTNLSKLVPTSTARHPLPPAEFIDWC
ANGAGELPVLCYDDECGAGGCRLWWLNSLGADAYVINGGFQACKAAGLEESGEPSSLPRPATHWPFKTA
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1okgA01
XSAPAAAPKHPGKVFLDPSEVADHLAEYRIVDCRYSLKIKDHGSIQYAKEHVKSAIRADVDTNLSKLVPTSTARHPLPPX
AEFIDWCXANGXAGELPVLCYDDECGAXGGCRLWWXLNSLGADAYVINGGFQACKAAGLEXESGEPSSLPRPATHWPFKT
A
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 05 Mar 2006 23:31

Cut based on decision in database "DomChop" on "cathdb"