CATH Domain: 1oisA02 XML data for domain: 1oisA02

Molscript image for 1oisA02
1oisA02
PDB coordinates for domain 1oisA02

PDB 1ois, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.170 Beta Complex
2.170.11 DNA Topoisomerase I; domain 2
2.170.11.10 DNA Topoisomerase I, domain 2 Gene3D
2.170.11.10.1
2.170.11.10.1.1
2.170.11.10.1.1.1
2.170.11.10.1.1.1.1
2.170.11.10.1.1.1.1.1

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Segment boundaries for domain 1oisA02

Chopping figure for domain 1oisA02
DomainStart PDB ResidueStop PDB Residue
1oisA01 160 251
1oisA02 141 159
1oisA02 255 363

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 2.170.11.10.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1k4tA01 90.90 NucleolusProtein bindingChromatin bindingDNA topoisomerase 1DNA topoisomerase I [EC:5.99.1.2] 2.170.11.10 143 57 89 1.28 1.43
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1oisA02
DTIKWVTLKHNGVIFPPPYEKKQIRLEREKFEEDYKFCELDGRREQVGNFKVEPPDLFRGRGAHPKTGKLKRRVNPEDIV
LNLSKDAPVPPAPEGHKWGEIRHDNTVQWLAMWRENIFNSFKYVRLAA
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1oisA02
DTIKWVTLKHNGVIFPPPYEKKQIRLEREKFEEDYKFCELDGRREQVGNFKVEPPDLFRGRGAHPKTGKLKRRVNPEDIV
LNLSKDAPVPPAPEGHKWGEIRHDNTVQWLAMWRENIFNSFKYVRLAA
BLAST against CATH

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Domain History Events (3)

Update comment by auto on 16 Oct 2007 19:44

Around September/October 2007, this domain was renamed from "1ois002" to "1oisA02" as part of the work to deal with the remediation of the PDB (see http://remediation.wwpdb.org). Please see ticket:207 or wiki:Remediation on the CATH Trac system for more details.

Insertion by lewis on 18 Jan 2007 20:16

Rechopping chains just before release v3.1.0 in order to fix missing fragments.

Domain assigned by lewis on 18 Jan 2007 20:16

Reassigning this domain to its previous classification as part of fragment fixing process in preparation for release v3.1.0.