CATH Domain: 1oi4A00 XML data for domain: 1oi4A00

Molscript image for 1oi4A00
1oi4A00
PDB coordinates for domain 1oi4A00

PDB 1oi4, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.880 Gene3D
3.40.50.880.15
3.40.50.880.15.1
3.40.50.880.15.1.1
3.40.50.880.15.1.1.1
3.40.50.880.15.1.1.1.1

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Segment boundaries for domain 1oi4A00

Chopping figure for domain 1oi4A00
DomainStart PDB ResidueStop PDB Residue
1oi4A00 2 193

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 3.40.50.880.15.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2vrnA00 91.19 Protease I [EC:3.2.-.-]Deinococcus radioduransProtease I 3.40.50.880 184 34 89 1.94 2.18
3cneA00 84.73 Putative protease IBacteroides thetaiotaomicron 3.40.50.880 167 17 83 2.06 2.47
1iphC03 83.94 Metabolic pathwaysMethane metabolismTryptophan metabolismCatalase [EC:1.11.1.6]Catalase activity 3.40.50.880 154 12 72 1.85 2.56
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1oi4A00
SYYHHHHHHLESTSLYKKAGLSKKIAVLITDEFEDSEFTSPADEFRKAGHEVITIEKQAGKTVKGKKGEASVTIDKSIDE
VTPAEFDALLLPGGHSPDYLRGDNRFVTFTRDFVNSGKPVFAICHGPQLLISADVIRGRKLTAVKPIIIDVKNAGAEFYD
QEVVVDKDQLVTSRTPDDLPAFNREALRLLGA
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1oi4A00
MSYYHHHHHHLESTSLYKKAGLSKKIAVLITDEFEDSEFTSPADEFRKAGHEVITIEKQAGKTVKGKKGEASVTIDKSID
EVTPAEFDALLLPGGHSPDYLRGDNRFVTFTRDFVNSGKPVFAICHGPQLLISADVIRGRKLTAVKPIIIDVKNAGAEFY
DQEVVVDKDQLVTSRTPDDLPAFNREALRLLGA
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:18

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:18

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:41

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"